Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02152 ATGAGCAGTGAAAGGAGAATTGGGGTGGCTTTGGATTTCTCTAAGGGAAGTAAGATCGCTCTCAAATGGGCTATTGATAATCTTCTCCGCAACGGCGACACACTCTTCATCGTCCACATCAAGCACGCCCAAGGCAGTGAATCCCGAAATCTTCTATGGTCCACCACTGGGTCACCACTGATTCCGTTGTCGGAGTTTCGTGATAAGGATGTGATGCATCATTATGAGGTGGATTCTGATGCCGAGGTGTTGGACCTGCTTGACACCGCTTCTAAGCAGAAACAGGTGGCTGTGGTGGCAAAGCTGTACTGGGGCGATGCAAGAGAGAAAATTATTGAAGCTGTTGGGGATTTGAAGCTTCACTCTTTGGTCATGGGTAGCAGAGGCTTGGGTGCCATACAGAGGGTGTTGCTGGGGAGTGTGACCAATTATGTCACCATAAATGCAAGTTGCCCTATAACGATTGTGAAAGACTCTGCCCCTTCCACTATCTGA 495 0.4869 MSSERRIGVALDFSKGSKIALKWAIDNLLRNGDTLFIVHIKHAQGSESRNLLWSTTGSPLIPLSEFRDKDVMHHYEVDSDAEVLDLLDTASKQKQVAVVAKLYWGDAREKIIEAVGDLKLHSLVMGSRGLGAIQRVLLGSVTNYVTINASCPITIVKDSAPSTI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02152 164 FunFam Universal stress protein family protein 1 160 - -
Vimu5g02152 164 CDD USP_Like 6 156 - -
Vimu5g02152 164 PANTHER IMP2'P 1 159 - -
Vimu5g02152 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Vimu5g02152 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Vimu5g02152 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vimu5g02152 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Vimu5g02152 164 Gene3D HUPs 2 163 IPR014729 -
Vimu5g02152 164 Pfam Universal stress protein family 5 157 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02152 Vimu-Chr5 32953729 32955017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02152 4 46 Receptor kinase-like Gene Family AT5G35380 48.837 4.74e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02152 - - gmx:100306505 290.812