Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02134 ATGAAGTCCAATTGCATTCGAAGCCAGTCCACACAGCAAAGGTGGACTCTTCAGGGGATGACAGCTCTCGTCACTGGTGGAACTCGCGGAATTGGGCGGGCCATTGTGGAGGAATTGACGGGGTTTGGAGCCAGAGTTCATACCTGTGCCAGGAACGAACACGAGCTCACTGAATGCCTGAAGAAATGGAACGATTCGAGCTTTGAGGTCACTGGCTCAGTTTGTGATGTCTCAGTTCCAAAGCAGAGGGAGGCGCTCATGGAGTCTGTTTCCTCTCTTTTCCACGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCGGTGACAGACTTCACAAGTGCAGAGTTTTCCACTCTTATTGATACCAATTTGGGATCTGTCTTTCACATATGTCAACTTGCATATCCACTTTTGAAAGCATCGGGAATAGGAAGTGTTGTGTTTGTCTCTTCTGTTTCTGGGTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGCTTGTTTAACAAATGCTGTGATGTTGATGAGTTTATCAAATTTTGAAGGGGCAATTAATCAACTCACAAGAAATCTAGCTTGTGAGTGGGCAAAAGACAATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAGAACTTCAATGGTAGAACAGGTTGTTCTTCTGCTTTGTCCTGTAACCATTGGTTAG 711 0.4459 MKSNCIRSQSTQQRWTLQGMTALVTGGTRGIGRAIVEELTGFGARVHTCARNEHELTECLKKWNDSSFEVTGSVCDVSVPKQREALMESVSSLFHGKLNILINNVGTNIRKPVTDFTSAEFSTLIDTNLGSVFHICQLAYPLLKASGIGSVVFVSSVSGFVSLKSMSVQGATKACLTNAVMLMSLSNFEGAINQLTRNLACEWAKDNIRSNAVAPWYIRTSMVEQVVLLLCPVTIG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02134 236 PRINTS Glucose/ribitol dehydrogenase family signature 185 204 IPR002347 -
Vimu5g02134 236 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Vimu5g02134 236 PRINTS Glucose/ribitol dehydrogenase family signature 206 223 IPR002347 -
Vimu5g02134 236 PRINTS Glucose/ribitol dehydrogenase family signature 21 38 IPR002347 -
Vimu5g02134 236 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Vimu5g02134 236 Gene3D - 2 231 - -
Vimu5g02134 236 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 226 IPR036291 -
Vimu5g02134 236 PANTHER TROPINONE REDUCTASE 13 226 IPR045000 GO:0016491
Vimu5g02134 236 Pfam short chain dehydrogenase 21 181 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02134 Vimu-Chr5 32851287 32852462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02134 12 227 Miscellaneous Gene Families AT2G29290 57.870 6.22e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02134 K08081 - gmx:100799534 367.851