Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02126 ATGACTCCCACTCTTACGTCCAATTCATCCCTCCTAACCACAACCCCCCATTCAAGGTTCAGCCTTCGGAACCCAAGGCTCAGAGTCTTCGCCAAGAAGTCTGGATCATTCCCATCATTTGGGCTTGGCAAACCCAAAGATGATTCATCTTCTCCTGATGACAAAGATACCTCTTCCAATTCCAACCCCTTTCGTTTAGACTTTGGAAAGATACCCGATGTCACTTCCTTGATCCCAGTTCCAACCAACAATTCTTCGCCAGGCTTTTCATTCGGAAATCCAAGGCGCAAGGATCCTTCAACCGTCTTCGTTGCTGGCGCCACAGGGCAGGCTGGTATTCGCATTGCACAGACGCTTCTTAGGGAAGGTTTCAGTGTTCGGGCTGGAGTCTCCGAACTTGGCTCTGCACAGGAATTGGCTCGTCTTGCTGCTCAATACAAGATTATATCAAATGAGCAAGCAAAGCGTCTGAATGCTGTGCAATCAAGCTTTGACAACGCTGACTCAATAGCCAAAGCTATAGGCAACGCCAGCAAAGTGGTTGTCACCATTAGTTCCGCAGAGAACGGTCCAACAGCAGAGGTGTCAGCATCAGACGCATTGCAAGTGGTTCAGGCAGCTCAGTTGGCCGGAGTTGGCCACGTGGCTGTCATCTACGACGAGAACGGCGTTGGGGCCTCAACCTACAATGTACTGGATGGTCTCTCCTCCTTCTTCAACAATATCTTCTCCCGGTCTCAACCCTTGACCATACAAGAGTTCCTACAGAAAGTTATTGAAACTGACGTCAAATACACCTTCATCAAGACAAGTTTGACCGATGATTTCGCACCCGAAAGTTCCTACAATGTGGTCGTCTTGGGCGAGGGAAACACTAGTGCGAACGACTATAAAGTAGCGAAGTCCAAGATTGCATCCTTGGTGGCTGATGTCTTCGCCAATACTGAGGTAGCAGAAAACAAGGTCGTGAAAGTGTACTCGGATCCGAATGCCCCTTTGAAGCGTGTGGATGAACTTTTTAGTCCTATTCCAGAGGATGGAAGAAGGAAAGCCTATGCTGAAACGCAGGAGAAAGCAAAGGCAGAGGAGGCGGCAAGAGTGGCTGCAGAAAAAGCAAGTGAAGCAGCTGAATCAGCAAAGAAGTTGGAACAAGAGGTGAAAAAGCTTTCGCAGCAAGAAGCACTGGCTGCTAATCTGGCCCAAGAAGCACAAGAGAAGGCAGAGGCAGCTGGAGCCTCTGTGGAAAACCTCTTGAACAAGGCAAAAGACTTTGGTGCAGGGTTTTCCTGGGAAAAGTTGAGCACACAGATTACTACTTCAATCCAAAAACCTGATGAGGATGAGAAACCAAAGGTTCAGCTAGCCACAGTAAGGGGACAGGCCAAGGCTCGGAACCTGGCGCCAAACAAAGCCGTGGTTAAACAAACTCCTCCGAGAAGAGCAGCTAGTAAACCAAAGGAGGAAAAACCGAAGAAGGCAGAGACAGCAAAAGAGGTGAGAAATGTATTTGGTGGCCTGTTCAAACAAGAGACTATCTATGTTGATGATGACTAG 1554 0.4846 MTPTLTSNSSLLTTTPHSRFSLRNPRLRVFAKKSGSFPSFGLGKPKDDSSSPDDKDTSSNSNPFRLDFGKIPDVTSLIPVPTNNSSPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVSELGSAQELARLAAQYKIISNEQAKRLNAVQSSFDNADSIAKAIGNASKVVVTISSAENGPTAEVSASDALQVVQAAQLAGVGHVAVIYDENGVGASTYNVLDGLSSFFNNIFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFAPESSYNVVVLGEGNTSANDYKVAKSKIASLVADVFANTEVAENKVVKVYSDPNAPLKRVDELFSPIPEDGRRKAYAETQEKAKAEEAARVAAEKASEAAESAKKLEQEVKKLSQQEALAANLAQEAQEKAEAAGASVENLLNKAKDFGAGFSWEKLSTQITTSIQKPDEDEKPKVQLATVRGQAKARNLAPNKAVVKQTPPRRAASKPKEEKPKKAETAKEVRNVFGGLFKQETIYVDDD 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02126 517 MobiDBLite consensus disorder prediction 34 68 - -
Vimu5g02126 517 MobiDBLite consensus disorder prediction 459 496 - -
Vimu5g02126 517 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 517 - -
Vimu5g02126 517 MobiDBLite consensus disorder prediction 480 496 - -
Vimu5g02126 517 Coils Coil 352 420 - -
Vimu5g02126 517 Gene3D - 93 334 - -
Vimu5g02126 517 Pfam NAD(P)H-binding 106 314 IPR016040 -
Vimu5g02126 517 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 331 IPR036291 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02126 - - gmx:100801140 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02126 5 32816308 32819392 Vimu5g02126 5 32816308 32819392 ECH