Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02058 ATGTCGGTGAGTTCGAGTTCCAGGGGAAGGATAACGACGGAGCTTCAAGTTCCCAAGAAATGGACTGACAGAGAAACCAGTCCAGAGAGAACCAAAGTTTGGGCCGAGCCCAAGCCCAAAACGGCCAGAAAAGTCTCCGTCGTCTATTACCTCTCCCGAAACGGCCAACTGGAACACCCTCATTTCATGGAGGTTCCTCTCTCTTCACCTCAAGGACTTTACCTCAAAGACGTCATCAACCGCTTGAACGTTCTCCGAGGGAAAGCCATGCCCACCATGTATTCTTGGTCCTCCAAACGGAGCTACAAAAACGGCTTCGTTTGGCATGATTTGTCAGAGAACGATTTCATCTACCCGACGCAGGGGCAGGACTACATTCTCAAAGGATCGGAGATTGTTGAGCATAGTGTCGCTGCCGTTGCGAGGGTTAACAAATCGGAAGAGGAGTCCGGTTCGCCTGTGGTGATCACGAGGCGGCGGAACCAGTCGTGGAGTTCTATCGATTTGAACGAGTACCGTGTTTATAAATCCGAATCGTTCGGTGACTCGGCTGGGAGAATCGGTGCTGACGCGGCCACTCAGACGGAGGAGAAGCGGAGGCGGAGGAGGGCGGCGAGGGAGGAAGAGGCGGAAGAGATTCACGAGAAGAATGATGGAATTGACGCGGGAATGGAAGGGGAGAGGGTTTCGCACGTGACTTGTGATAATAACAATAATCATACTACGGAGCTGAGCAGGGATGAGATCTCGCCTCCGCCGTCGGATTCGAGCCCTGAGACGCTGGAGACGCTGGAGACCCTGATGAAGGCAGATGGGCGGCTCGGATTGCGGTCTACGGAATCGGAGAAGGAGAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCGTCGTCGGTTTTGTTGCAGTTGCTATCGTGTGGCGCTGTGTCTTTTAAGGAGTGTGGGGTTAACGCAGTGAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGTGGAGCAGGGAATCATGTGGAAAAGGAGACAGGGATATCAATGGAAATTCCGGATTTGAACAGGCTTAGGTTGGAAGATAAGGAATATTTTAGCGGAAGCTTGATCGAAACGAAGAAAGTGGAAACCCCTACTTTGAAGAGGTCTTCTTCTTACAATGCAGATAGGTATGCTACATTTTAG 1194 0.5184 MSVSSSSRGRITTELQVPKKWTDRETSPERTKVWAEPKPKTARKVSVVYYLSRNGQLEHPHFMEVPLSSPQGLYLKDVINRLNVLRGKAMPTMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVEHSVAAVARVNKSEEESGSPVVITRRRNQSWSSIDLNEYRVYKSESFGDSAGRIGADAATQTEEKRRRRRAAREEEAEEIHEKNDGIDAGMEGERVSHVTCDNNNNHTTELSRDEISPPPSDSSPETLETLETLMKADGRLGLRSTESEKENLTVESCPSGRMRASSVLLQLLSCGAVSFKECGVNAVKDQGFSLVGHYKSRMPRGAGNHVEKETGISMEIPDLNRLRLEDKEYFSGSLIETKKVETPTLKRSSSYNADRYATF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02058 397 Pfam Protein SOSEKI, plant 45 394 IPR010369 -
Vimu5g02058 397 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 24 392 IPR010369 -
Vimu5g02058 397 MobiDBLite consensus disorder prediction 192 217 - -
Vimu5g02058 397 MobiDBLite consensus disorder prediction 183 217 - -
Vimu5g02058 397 PIRSF UCP031043 12 397 IPR021182 -
Vimu5g02058 397 MobiDBLite consensus disorder prediction 233 259 - -
Vimu5g02058 397 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02058 Vimu-Chr5 32376299 32377586 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02058 - - gmx:100779732 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02058 5 32376299 32377586 Vimu5g02058 5 32376299 32377586 ECH