Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02055 ATGTCTCGTATCTCCACATTCTATCTTCTCGCTTACAACTCCTTTCAGACCGTTGGATGGACGCTTTCGTTAATTAAGATTTTGTACAATCTTATCGCCACTGCCTCCGTCAACGGAACCTATGCTTCCGCCGGCAACTTGATTTGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACACGGAGCCATTGGTATTGTGCCCAGCGGAGTTTTGCTTCCTCTTATGCAATGGGGAGGAAGGACCCACTTTGTGCTTGCCATCGTTCGGAAACTTGATGAGCTCCAGGAACTTCCTTCAGTTTTTATCACTTTTCTTGCATGGAGCATGGGTGAGGTCATTAGGTATTCACATTATGCTTTCAGTTGTTCGGGAAATTGTCCTTCTTGGATGACCTATCTCAGGTACACCGCGTTTATTCTGCTGTATCCTTTGGGCGTGGGTCCTGGTGAAATATGGACAATGTACCAGGCGCTTCCAATTATAAAGAAGAAGAATCTCTATGCAGATTCCTTTTCAGGCCTCCCATTTAGTTATTATGATTTCCTTAAGGTTGTACTTGTAGCTTATCCATTCCTTTGGTTCAAACTTTACCTGCACATGTTCAAGCAACGACGTGCGAAACTTTATAAACGCCATGACAAGAAAACGGCTTGA 657 0.4368 MSRISTFYLLAYNSFQTVGWTLSLIKILYNLIATASVNGTYASAGNLICFLQCAAFLEVIHGAIGIVPSGVLLPLMQWGGRTHFVLAIVRKLDELQELPSVFITFLAWSMGEVIRYSHYAFSCSGNCPSWMTYLRYTAFILLYPLGVGPGEIWTMYQALPIIKKKNLYADSFSGLPFSYYDFLKVVLVAYPFLWFKLYLHMFKQRRAKLYKRHDKKTA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02055 218 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 6 211 IPR007482 -
Vimu5g02055 218 Pfam Protein tyrosine phosphatase-like protein, PTPLA 52 209 IPR007482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02055 Vimu-Chr5 32360271 32363927 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02055 K10703 - gmx:100527607 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02055 5 32360271 32363927 Vimu5g02055 5 32360271 32363927 ECH