Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02047 ATGGCACCTTTGAAATCGCTGGAGAAAGAGTACCCTCTTATTGACTCCAATTTTCAAAGCTTCTGTGCCTCACACGCCATTTTCTCTGTTCAAGATTTCCTTCTGCATGATATCGACGCATTAATTGCCTTGGCTGATAATCACTGTGCTTCACAGACACTCAAGCAAGGAATCGACCAGCTTCTGTCAATAATAGATGCTCGTCATCCACCGTTGCTAAATGGCTTGCAGCTCTTGGAAGACGTTCAGCGGAATAAACGTGTTTTATCTACTGGATGTGAAGGGATTGACGCATTGCTCGGAGGTGGATTACGAGAAGGACAATTAACTGAACTTGTTGGGTCATCCGCATCAGGAAAGACACAGGCATGCCTACTGTCTGCTGCAACTGTTGCAAAACATAAGAGTTCAGTTATATACTTAGATACAGGCAACTCCTTTTCACCTCATCGTATTGCACGTTTTGTTGGACAGTCTTCTGGTTATGATTCTGAGAATCAGGCTGATCATATGCTCAAAATAGTATTGGACAGGATAATTTGCCACTCGGTGTTTGACATCTATCAGATGCTTGATGTGCTGCATCAACTGAAGATTAATTTAAGATCTGAGATTGTGAAATCAAATCAGCACGTTCGATTGCTTATTGTTGATTCAATCTCTTCACTGATTACCCCCATCCTTGGGGGCAGTAGTCCTCAGGGACATGCTTTAATGATATCTGCTGGGTATTTACTGAAGAAGTTAGCTCATGAGCATAATATTGCTGTTTTGGTAACGAATCATGTGGTGCGTGGGGAAGATGGTATTTCCAAACCAGCTCTTGGAGAGAGTTGGAAGAGTGTCCCACATGTACGGCTTTTGTTTTCCCAAGATTGTGGAAGCAATGTGTGCAATATTTCAATGCTAAAACATCCATCTATGGCCTCTGGTAGAGTTGCAAGTTCTACTATGTTTTTATGA 963 0.4216 MAPLKSLEKEYPLIDSNFQSFCASHAIFSVQDFLLHDIDALIALADNHCASQTLKQGIDQLLSIIDARHPPLLNGLQLLEDVQRNKRVLSTGCEGIDALLGGGLREGQLTELVGSSASGKTQACLLSAATVAKHKSSVIYLDTGNSFSPHRIARFVGQSSGYDSENQADHMLKIVLDRIICHSVFDIYQMLDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGGSSPQGHALMISAGYLLKKLAHEHNIAVLVTNHVVRGEDGISKPALGESWKSVPHVRLLFSQDCGSNVCNISMLKHPSMASGRVASSTMFL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02047 320 Pfam Rad51 88 296 IPR013632 -
Vimu5g02047 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 313 IPR027417 -
Vimu5g02047 320 FunFam DNA repair protein RAD51 4 74 319 - -
Vimu5g02047 320 CDD Rad51D 101 305 IPR047323 -
Vimu5g02047 320 Gene3D - 72 317 IPR027417 -
Vimu5g02047 320 ProSiteProfiles RecA family profile 1. 85 263 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Vimu5g02047 320 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 4 1 316 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02047 K10871 - gmx:100780427 536.184