Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02043 ATGGTCACTGAGGGGGATGCTCAAGCCCCTACAGTAACTTTCTTCATGCATGACATCATTGGTGGATCAACCCCTTCAGAAAGAATCGTTGCTGGCACCATTGTAGACACTCAGACAGCTAAACTTCCTTTCTCAAAACCCAACAACAGGATCTTCCCCTTTAAAGGTGCCATACCATTAGTTGATACAAGCACTGCCACTTATCCTACACATTCCAGCACCACCATGTTCATAAAAAACATTGACAAAAACAAGGTTGTTATCGATAGGAATCCACTAGGAGCATCACCAGACAAGTTTTTGTTCGGAAGAATAACGGTTATTGACGATGAAGTTACGCAAGGGCATGAGTTTGGGTCAGAGGTTATTGGTAAAGCACAGGGATTTCATTTGACTAGCTCATTGGATGGAAGTAGCCGAACCATGGCATTTACGGTTGTGTTTGGTGGTGAGGGTGATGAGGAGGAGGATGCTGTTAGTTTCTTTGGTGTGCACAGGACAGCTACAAAGGAGTCTCATATTGCTGTAGTTGGAGGAACTGGAAAATATGATAATGCAAAAGGGTATGCCAAAATTGAAACACTGCCTTCACCTCAACAACATACCACAAATGGGTTGGAAACACTTCTTCAAATTACTGTATACATAGCCTAG 654 0.4297 MVTEGDAQAPTVTFFMHDIIGGSTPSERIVAGTIVDTQTAKLPFSKPNNRIFPFKGAIPLVDTSTATYPTHSSTTMFIKNIDKNKVVIDRNPLGASPDKFLFGRITVIDDEVTQGHEFGSEVIGKAQGFHLTSSLDGSSRTMAFTVVFGGEGDEEEDAVSFFGVHRTATKESHIAVVGGTGKYDNAKGYAKIETLPSPQQHTTNGLETLLQITVYIA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02043 217 Pfam Dirigent-like protein 85 216 IPR004265 -
Vimu5g02043 217 Gene3D - 67 212 IPR044859 -
Vimu5g02043 217 PANTHER DIRIGENT PROTEIN 24-RELATED 6 216 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02043 Vimu-Chr5 32280105 32280888 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02043 - - vra:106778706 419.468