Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02041 TTGCTCCAACTTATTCTCTCTACTTTATATGATTATACCTCGCCACTGCCAAACAAATTAACCAATATACTCGTTACTCGCTCCACAAAAACCATGAAAATGATGAAAGGAATTGATTTGTTGTGTCCTTCTTCAGCTTCCACAGCTGTAACTTCTAGCATGCACCGTCGTTCTACGGCGCGTGGAAGTATCAAAAGCTGCGACCATGACGGAAGGAAAAGCCAACTCTGTGTACCTTGTTCATCCCAATTGCCCTTAACTCCTAAGCCTCACTTGGAGAAGCACAGAAAGAGCTCGTCTGATAAGGGTAACTGTGACACGCGTAGAAAAAGTTCTGTTGATGTTAATGACCTATATACTCATGCCAGTGCTGAGCGTTCATCCAGAAGATATCTCCTTGCTGACGCGCCACTCGTTGAGTGGGTATCAGAGTCTAATAAATTCACACAAATGGTTCCTTCTCAACATGATGTCGAAGACAAGACCATGGTTATCAAAAGAAACCATGCTCCTACTCTTCGCTCCTCTTCCTCAGCTCGCTCCAAGGATCAGGTCGTGGTTTTGAGGGTGTCATTGCACTGCAAGGCCTGCGAAGGAAAAGTTAGAAAACATATTTCAAAAATGGAAGGAGTGACATCATTCAGCATAGAAATGGAGACAAAGAAAGTGACGATAATCGGAGACGTGACACCAATGGGGGTACTGGCGAGTGTATCCAAGGTGAAGAATGCACAACTTTGGCCATCTCTCTAG 753 0.4436 MLQLILSTLYDYTSPLPNKLTNILVTRSTKTMKMMKGIDLLCPSSASTAVTSSMHRRSTARGSIKSCDHDGRKSQLCVPCSSQLPLTPKPHLEKHRKSSSDKGNCDTRRKSSVDVNDLYTHASAERSSRRYLLADAPLVEWVSESNKFTQMVPSQHDVEDKTMVIKRNHAPTLRSSSSARSKDQVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIEMETKKVTIIGDVTPMGVLASVSKVKNAQLWPSL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02041 250 CDD HMA 187 240 IPR006121 GO:0046872
Vimu5g02041 250 MobiDBLite consensus disorder prediction 89 110 - -
Vimu5g02041 250 Pfam Heavy-metal-associated domain 188 233 IPR006121 GO:0046872
Vimu5g02041 250 PANTHER OS08G0405700 PROTEIN 40 249 IPR044526 -
Vimu5g02041 250 ProSiteProfiles Heavy-metal-associated domain profile. 183 249 IPR006121 GO:0046872
Vimu5g02041 250 MobiDBLite consensus disorder prediction 51 72 - -
Vimu5g02041 250 Gene3D - 181 245 - -
Vimu5g02041 250 SUPERFAMILY HMA, heavy metal-associated domain 184 241 IPR036163 GO:0046872
Vimu5g02041 250 MobiDBLite consensus disorder prediction 87 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02041 Vimu-Chr5 32275497 32276475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02041 - - gmx:100807544 338.191