Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02000 ATGGATTCCCTTAATAACATTCCGCTTCTAGACGAAGACGATTCGTTGCTCTTCGATGATTCTGCACCTTCCACCGCAGATGTCTTCTCTTGCTCCCCTCTCATACCTATCAGATCGATTCCTCTTCAAACCGAAAGTGGAGTTGCGGACTCTGAAAATCGAAATTCCTCCGTTAGTGACAGTGCCAACAAAGAGAACGCGAATTGGAACAAACCGCAGAAGCTTAGCTTGGATCCTCATCAAATGAAGAGGAAGAAGAAAGGAGGCGGTGTTTTGAATCCGGAGGAGCTTTCTATAATTAGTGGCACCGCCTCTTCTAAGTCAGGGTTGGATTTGGAAGTGATCCACGAAGAAGAGTACGTAGGTACATCGATAAATTTGCAGGAGATTGAAGAAAATTTGTTTATGCATTCATCCGATGCTCTTCCTCTAGAAGATAGAAAAATTGGTGCTCGGTTCTCTCCAAAGCCTGCGGCATTAGCCAAAGCTTCTACTGCTCCGGTTTCCTCGGCCAAGAGGAAAATACTTACTGTCAATGACTCCGTTGGCAGCAGACCTAAACGCAATGCTTGTCCTCCACGGCTGCCAGTAGCTTCGTCCTCATATCCTTGTCATTTCTTGTTTAGGATAGATATTAAGTGGATGAAAGCGCCGAGTAAAGAAGTGAAAGTCGCTAGGACACCTGGTCCTAAATTGGATGTTTCTGCCAGTACAACAACTGCTAGGAGTCGACTCTTGAACGCAGCCACTAATCCTCCGAAGCACGCTGGACTAAAAGCCTTGTCAAAAAATCCTAAAACCATCCCAAGTAACCCAAAGGTTGTTCGTGCTGATAAAGGTTCGGTTACCAGAACACTAGCCACGCCAGCTGGGAAACACTTGAATAACTCAGTTGAAACACATCCACCAGCCAGAAAGATTCAGTCAGGAACTGAAGCAAATAAGGAGTCAGAAACTAGTCTCTCACGAGGCCCATCTGACATTAGTGAGAAAAAGCAAGAGACACAACTTCAAATAACAAAATTATCAGGCCTGCGGATGCCATCTCCCTCACTGGGATTCTTTTCTATAGCAAAAGCTCCCAGTTCACATAGCCAATTACAGAAAACTTCTAAACCTTGCAAGCCTGCTAAGAGTAACATTCTTAAATTACAGAATTTAGAAACAAATTCTGTTAATGAGGCAAGACTAAAACATGCACCTGCGATGAGGTCTGAAATTGTCAAAGGGAAGAATTGCACTGAGGAGTTAAGCCTTTTCGATGTGAAGTCAGAATTGAGCATGCAAGTGGATGATAAGCAGATGACTTGTGTAGAAGCGAAATATAATTCTGTGGGCTCTAAAAAAATAAGCAAGCAAGAATATGTTGAAAACATTCTTGGTCATGTCAACGTAACATACGAGGAACACGGAGAACTATGTAGCAGTAATAATGCTTCTAGCGTGGAGGATGCGGGATTTCCTAGACATGAAAAAAAGCTTTTTTCAGAGAGTCACGCTCAAGGGCAGTTGGAGAAAGAAACTGGTCAGCCTGATGTTTCGTTAAAAGGGTATCAATCTGTATTGCAGAAACGACCATCGATGCACCATCATGGAGGTGCTTTTGATCTTGTTAAAAGTGGAGGAGATGCTCAAAATTGTAGTGAAACCACCGGAAGTAATTTAGAGGCAGTTAATCAACAGTTACAGGGGGAACAACTCAAGACTACAAGTGCTGTTAGGGTGGGCGAAATCATGTCAACAAGAGAAAGTGAATCTCATGTAAATAGTTGTCAGAAAACTATACCAGAAATCAAATGTGCTGCTGCAAGTGAACCAAAAATAGCTAAAATTGAAGGCTGTCAGTTATCGGTAGATGATCAGTCAGGTTTCATACAGACAATACCAGTGTTGGAACAATGTGATCATAGTACTCAAGTCTTTGAATTGGACAGGTTGAGTGAAGATTGCATAACCGTTTCTGCAACAGTTTTCAACACTGAGTTAAACAATGTTTCACAGGAAAGAAGACCTTTTCGTGAGGATAATGTACAGAATCTTCTCCTTACATCCCAAGTATGTCCAATGTTAAAATCTGATTTTGTTTTTGGTGAAAATGAAATGTCAACCAATAACCACTGTACAATTTCCAAGTTGCAGCTTAGGGATGAGGATTCTTCTAGGGAGGCTTCTATCCACTATGATGTTCCGTGTTATCTCCCTGGAAACTTTGAGCAACAAACTAGCAACATTACGTATTCTAAAGTTAAGAAAATGGTCAGTGAAGATGTGAGTTTAGTGTTAAATCATGGTGACTTGCTTGATCAAAGTGCGTTTTCTCAAGTATCTGCAGACATTAATTCAAACACCAAAGATTTTACTGGTTCTGAAGCTGAAAAACCCTCTAGCTGCTTACAACATACACTATTGACTCGGTTAGTCCGAGACGTTGATCACACTAACACAGATATTAAAGAATCACATGTGGAAGATGCGCAGATGCGGTTGCTTAATGAAAATCTAGAGCCATACAAAAGAAATAGTAAGCATTTAAATGCTTTTATTACCAGTAAGTTTCCATTGGCAGATAACAATAGTATGAACGAAAATTGTAGTCTTTCTGATATTCAAAGCCTCGGTGCTGCTGTTCGTGCAGATCCTGAGAACGGTAATAACATACTACACTCTGACAGCGACTGGCTACCCACAAATATTGCTTCTTCTGAAGAAATCAATAAATCAATGGAAGATGTGCATGCGCGTTCGTTTAATGAAAACCCAGCGCCATTCAACTGCAACAGTAAACACTGCCTTGTTACAAATGATACTGATTTTCAAAGGTCTGGTGCTGTTGGTGCTGCAGATTCAGATGATGTTAATAGCATACTACTAGACTTGAATGGTGATATGTCCACACATGTTGCTCCTTCTGAAGAGATCAAGAAAACAATTTTATTTGAGGGTGCATTATGTCATATCTATACAAGTGAAAACGGTGCTTCCAATAATCATAGTCAGGTTATGCCTGAAAACAAAGATGGAAATATTCGTACGGATGATTTACCAATCGATGATGCAAAAGAAGGTTATTCTAACATGTTGCCTTTAGTTGAATTTCAACTCAATGGTAAAATTCAGAAAATGTCTGAAAACAAAGATGGAGATCTTGATATGGATGATGTCAAAGACGGTTCTTCTGATATATTTCCTCTAGTTGAAGTTCAACTCGAAGACAACATTCAGGCCATGACTGAAAACAATGGAAGAAATCTTGATATGGATGATTTGCAAATGGGTAATGCAAAAGAAGGTTCTTCTGACATGTTTCTTTCAGTTAAAGTTCAAGTCAATGACAACATTCATGATATGTTTGAAAACAGTGATGGAAATGTTGATATGGATGATTCAAAAGAATGTTCTTCTGTCATACTGCCTTTAGTTGAAGCTCAACTCTGTGACAACATTCAGAAAATGTCTGAAAACAAAGATGGAGATCTTGATATGGATGATGTCAAAGACGGTTCTTCTGATATATTTCCTCTAGTTGAAGTTCAACTCGAAGACAACATTCAGGCCATGACTGAAAACAATGGAAGAAATCTTGATATGGATGATTTGCAAATGGGTAATGCAAAAGAAGGTTCTTCTGACATGTTTCTTTCAGTTAAAGTTCAAGTCAATGACAACATTCATGATATGTTTGAAAACAGTGATGGAAATGTTGATATGGATGATTCAAAAGAATGTTCTTCTGTCATACTGCCTTTAGTTGAAGCTCAACTCTGTGACAACATTCAGAAAATGTCTGAAAACAAAGATGGAAATCTTGATATGGATTATGTCAAAGACCGTTCTTCTGATATATTGCCTCTAGTTGAAGTTCAACTCGATGACAACATTCAGGCCATGACTGAAAACAATGGAAGAAATCTTGATATGGATGATTTGCAAACGGGTAATGCAAAAGAAGGTTCTTCTGACATGTTTCTTTCAGTTAAAGTTCAAGTCAATGACAACATTCAGGATATGTCTGAAAATAGTGATGGAAACGTTGATATGGATGATTCTAAAGAATGTTCTTCTGTCATATTGCCTTTAGCTGAAGTTCAACTCAGTGACAACATTCAGGCTATTTCTGAAAACAATGATGAAATTCTTGACATGGACAATGCAAAAGAAGGTTCTTCTGACATATTGCCTCTAGTTGAAGTTCAACTGGATGACAACATTCAGGCCATGTCTGAGAACAATGAAAGAAATCTTTATATGGATGATGCAAAAAAAGATTCTTCTTACATGTTGCCTTTAGTTGAAGTTCCACTCAATGACAACATTGTGGATGTGTCTGAAAATAATGATGGAAATCATGATATGGATGATTCAGAAGAATGTTCTTCTGACATATTGCCTTTAGTTGAAGTTCAACTCATTGACAACATTCAGGCTATTTCTGGAAACAATGATGAAAAGCTTGACATGGACGATGCAAATGAAGGTTCCTCTGAGACATTGCCTCGAGTTGAAGTTCAACTCGATGACAATATTCAGGCCATGTATGAAAACAGTGAAAGAAATCTCTATATGGATGATTTGCAAGTGGATTATGCTAAAGGTTCTTCTGACACGTTGCCTTTAGTTGAAGTTCAAGTCAGTGGCAATATGCAACATGTGTCTGAAAACAATGACGGAAATCTTGATATGGATGATTCAAAAGAATGTTCTTCGGACATATTGCCTTTAGTTGAAGTTCAAGTCAATGACAACATTATATCTTCTGAACGCATTACTTCTTCAGCAGAGAACAAAGATTCTTTTGCAGATGTAGTTGCCTGGAAACCTGAGGAGCGTTGTTCTTTAAGTGAAAGTTCAAATTTATCAGCTTCAGATCATCTAACCTTCAACCTAGATGAATTTTCCGATACTGACATGCTATATCAGTCCAAAGGTGGCATTTACTTTGCAGAAGATAACAGAAAAATAATTCACTTACATGAATCTGCTGCTAAAAGCAAGCAGGAAGTTCTTACAGGGAATCTTCCAACAAATGCTGCTGCATTTTCTGATGAATGGTTTACTGCAACCGATTCCGCTAAACAGAAATTGAATCAAAATCCCCCCCGTGGAGATAGGCGGGAAACTGTTGCTTGTGATACTGAGCTTCGAGATGATGGTTCTTCTAGGGATGCTTCTATTCAGCATCATGTTCACGGTGATGTCACGGGAAACATTGAGCAACAAACTAGCACGAGTACATATTCTAAAGCTGAAGAAATGCTTTGTGAGTACAAATTGAGGAATCATGATGACGTGGTTGATCAGAATGAACTTTCTGAAGTATGCGAAGATTTCATTTCAAACACCAAAGATTCTATGGGCAGTGGAGCAGAAAAACCTTCTGACCATATACAACATTCCCTACTGGGTCAGTTTGTCGAAGAATTTAATCAGACTAACAGAGAAATTGAGGAATCACATTTGACCACACAAGTGCAGTCATTTACTGAAAACCTAGTGTTATACAACTGCAACAGTAAACAATGTCTTGCTGTTTCTGATGGTAAGTTTCCATTGGCCGACAGTGACAATGTAAATGAAAATTCTCATGATCCTGATCTTCAAGGGCCTTGTGCTATTGCTGGTGTAGATTTCCAGAATGTTGATGACATACATTTACCCTTGGATGGTAATTGGCTGTCCACAAATACAGCTTCTTCTGAAGAAATCAAGAAAACAAATTTGTCCGAAGATGCATTAAAAGGATGTGATGTCCGTACATGTGAGTACAAGGCTTCCAATGACCATATTCAGGCCATGCCTGAAAACGAAGATAGATATCTTTATGCAGATGAGAGGCGAGAGCATTTGCAAACGATTGATGCAAAGAAAGCTTCTTCAGACATATTGCCAGTAGTTGAAGTTCAACTCAAAGACAACGTTGTATCTTCTGAAAGCAATTCGTTTATAGAAGAGAGCAGAGACTCCTTTACAGATGAAGTTGCTTGGAAACCTGAAGAGCATCGTTCAAGTGAAAATTCAAGCTTACCAGCTTCAGATAATCTTGTCTCCAACAACAGAGTCCCGCAGGTCTTTGAAATTAGTTTGTTGAACTCTACAACTTTTTCAGAAGAAGCTGGAACTAATATTTATGAGAAAGACGAGTGTCCTAATACCGACATGGAGCACCAGTCAAAAGGTGACATTAATTATGCAGAAGACAGCAACAAAGTCATTCATTTGCAGGAATCCGCAACTAAAAGCAAGCGGGAAGTTCCTACATTGAAGCCTCCGCCAAATGCTGCTCCATTTTCTGAAGAATGGTTAGCTGCAATTGAAGCCGCCGGAGAGGAGATCTTAACGATGAAAGGAGGTGCTGTACAAAATTCTCCCACTGAGAAGCCTCAGCACGAACCTGGTCCTTGGTCCCCGGTGAAGCGTAAGAATCAATCAATTGGACCATTTGATTGTACCAAACACAATATCCAGCCTTCCAGTTCATAA 6477 0.3929 MDSLNNIPLLDEDDSLLFDDSAPSTADVFSCSPLIPIRSIPLQTESGVADSENRNSSVSDSANKENANWNKPQKLSLDPHQMKRKKKGGGVLNPEELSIISGTASSKSGLDLEVIHEEEYVGTSINLQEIEENLFMHSSDALPLEDRKIGARFSPKPAALAKASTAPVSSAKRKILTVNDSVGSRPKRNACPPRLPVASSSYPCHFLFRIDIKWMKAPSKEVKVARTPGPKLDVSASTTTARSRLLNAATNPPKHAGLKALSKNPKTIPSNPKVVRADKGSVTRTLATPAGKHLNNSVETHPPARKIQSGTEANKESETSLSRGPSDISEKKQETQLQITKLSGLRMPSPSLGFFSIAKAPSSHSQLQKTSKPCKPAKSNILKLQNLETNSVNEARLKHAPAMRSEIVKGKNCTEELSLFDVKSELSMQVDDKQMTCVEAKYNSVGSKKISKQEYVENILGHVNVTYEEHGELCSSNNASSVEDAGFPRHEKKLFSESHAQGQLEKETGQPDVSLKGYQSVLQKRPSMHHHGGAFDLVKSGGDAQNCSETTGSNLEAVNQQLQGEQLKTTSAVRVGEIMSTRESESHVNSCQKTIPEIKCAAASEPKIAKIEGCQLSVDDQSGFIQTIPVLEQCDHSTQVFELDRLSEDCITVSATVFNTELNNVSQERRPFREDNVQNLLLTSQVCPMLKSDFVFGENEMSTNNHCTISKLQLRDEDSSREASIHYDVPCYLPGNFEQQTSNITYSKVKKMVSEDVSLVLNHGDLLDQSAFSQVSADINSNTKDFTGSEAEKPSSCLQHTLLTRLVRDVDHTNTDIKESHVEDAQMRLLNENLEPYKRNSKHLNAFITSKFPLADNNSMNENCSLSDIQSLGAAVRADPENGNNILHSDSDWLPTNIASSEEINKSMEDVHARSFNENPAPFNCNSKHCLVTNDTDFQRSGAVGAADSDDVNSILLDLNGDMSTHVAPSEEIKKTILFEGALCHIYTSENGASNNHSQVMPENKDGNIRTDDLPIDDAKEGYSNMLPLVEFQLNGKIQKMSENKDGDLDMDDVKDGSSDIFPLVEVQLEDNIQAMTENNGRNLDMDDLQMGNAKEGSSDMFLSVKVQVNDNIHDMFENSDGNVDMDDSKECSSVILPLVEAQLCDNIQKMSENKDGDLDMDDVKDGSSDIFPLVEVQLEDNIQAMTENNGRNLDMDDLQMGNAKEGSSDMFLSVKVQVNDNIHDMFENSDGNVDMDDSKECSSVILPLVEAQLCDNIQKMSENKDGNLDMDYVKDRSSDILPLVEVQLDDNIQAMTENNGRNLDMDDLQTGNAKEGSSDMFLSVKVQVNDNIQDMSENSDGNVDMDDSKECSSVILPLAEVQLSDNIQAISENNDEILDMDNAKEGSSDILPLVEVQLDDNIQAMSENNERNLYMDDAKKDSSYMLPLVEVPLNDNIVDVSENNDGNHDMDDSEECSSDILPLVEVQLIDNIQAISGNNDEKLDMDDANEGSSETLPRVEVQLDDNIQAMYENSERNLYMDDLQVDYAKGSSDTLPLVEVQVSGNMQHVSENNDGNLDMDDSKECSSDILPLVEVQVNDNIISSERITSSAENKDSFADVVAWKPEERCSLSESSNLSASDHLTFNLDEFSDTDMLYQSKGGIYFAEDNRKIIHLHESAAKSKQEVLTGNLPTNAAAFSDEWFTATDSAKQKLNQNPPRGDRRETVACDTELRDDGSSRDASIQHHVHGDVTGNIEQQTSTSTYSKAEEMLCEYKLRNHDDVVDQNELSEVCEDFISNTKDSMGSGAEKPSDHIQHSLLGQFVEEFNQTNREIEESHLTTQVQSFTENLVLYNCNSKQCLAVSDGKFPLADSDNVNENSHDPDLQGPCAIAGVDFQNVDDIHLPLDGNWLSTNTASSEEIKKTNLSEDALKGCDVRTCEYKASNDHIQAMPENEDRYLYADERREHLQTIDAKKASSDILPVVEVQLKDNVVSSESNSFIEESRDSFTDEVAWKPEEHRSSENSSLPASDNLVSNNRVPQVFEISLLNSTTFSEEAGTNIYEKDECPNTDMEHQSKGDINYAEDSNKVIHLQESATKSKREVPTLKPPPNAAPFSEEWLAAIEAAGEEILTMKGGAVQNSPTEKPQHEPGPWSPVKRKNQSIGPFDCTKHNIQPSSS 2158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 45 93 - -
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 45 75 - -
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 2112 2158 - -
Vimu5g02000 2158 PANTHER OS05G0121800 PROTEIN 1758 2134 IPR045882 GO:0008017
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 77 91 - -
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 247 337 - -
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 1691 1733 - -
Vimu5g02000 2158 MobiDBLite consensus disorder prediction 1697 1727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02000 Vimu-Chr5 31804756 31818253 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02000 - - vra:106756057 1665.59