Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01989 ATGGAGTGGGTGAAGACGAAGGAGTGCGCGAGGGAGTTCATGGTTGGGGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTCAAGCAGAGTTTGGTCAATGAAGATTCATTTATTGTCAAAAACTTAGGGAGAGATTCCTACATTGGAAAAAGACTCAGAGGACCCTGTGCCAAGCTTTTCGCCAAATTGAGCTTCTTCAACGAGTATTTGCCCGAGGATAAGGATCCTCTTCACGCTTGGTCCGTCATTTTCTTCGTTTTCCTTCTCGCCTTCTTAGCTTTGTATGTGAATTTTGAGCGTGATCCGGACGCGCCGCCGGTGAAGCAGGTGTTTCTGCATCCTCCTAGTGCTTCTCGTGTTGTGCTTCCTGACGGACGGTACATGGCGTATAAGGAGCAAGGTGTTTCGTCTCAAAGAGCTAGGTTTTCCATCATTGCTCCTCATAGCTTTCTTTCCTCCCGGCTTGCAGGGATTCCTGGAGTTAAACATTCTCTGCTGGAAGAGTTTGGTATTCGTTTGTTGACGTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCACCCCAAGCGGAACCTGGAATCCTCGGCAACAGATATGGCATTTTTGGCGGATGCTCTCGGTGTGAACAAGTTTTGGGTTGTTGGTTATTCAAGCGGGAGTATGCATGCTTGGGCTGCACTTAGATACATTCCTGATAGGCTTGCTGGTGCGGCCATGTTTGCTCCCATGGTGAACCCATATGATCCTATGATGACGAAGGAAGAGAGACGAAGAACTTGGAACAAATGGACACGGAGAAGAAAATTCTTGTACTTCTTAGCCAGGAGGTTTCCTAGATTTCTAGCCTTCTTCTATCAGCGAAGCTTCTTGTCTGGAAAGCATGGACAGATTGATAAGTGGCTGTCATTGTCTCTGGGAAGTAGGGATAAAGCACTGATGGAAGATCCAATTTATGAGGAATTCTGGCAAAGGGATGTGGAGGAATCAACCAGACAAAGAGATGTGAAACCTTTTGTGGAGGAAGCTGCTCTGCAGGTTACAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAGAGGAAACCGACTAGTGAGTTACTCAGTTGGCTGAAATCAATGTTCACTGAAACTGAGGAATATACAGGATTTCTTGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCCCCATCAATGACTGATTTTGTGCACCGCGTGCTACCCGGAGCCGCAGTACATAAACTCCCATATGAAGGCCATTTCACTTATATATACTTTTGTCATGAATGCCACCGGCAGATATTTACTACACTCTTCGGAACCCCACAAGGTCCACTCAGCATTCCTGTAAATGTAAATCAAGCCACCCTAGAAGCCAATATTGAACAGCAGGAAGGAGTAAACGATGATGAGTATGCTACAGACTAG 1455 0.4625 MEWVKTKECAREFMVGVAEMTVEFGKGCRDIVKQSLVNEDSFIVKNLGRDSYIGKRLRGPCAKLFAKLSFFNEYLPEDKDPLHAWSVIFFVFLLAFLALYVNFERDPDAPPVKQVFLHPPSASRVVLPDGRYMAYKEQGVSSQRARFSIIAPHSFLSSRLAGIPGVKHSLLEEFGIRLLTYDLPGFGESDPHPKRNLESSATDMAFLADALGVNKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPMMTKEERRRTWNKWTRRRKFLYFLARRFPRFLAFFYQRSFLSGKHGQIDKWLSLSLGSRDKALMEDPIYEEFWQRDVEESTRQRDVKPFVEEAALQVTNWGFSLSDLKLQKRKPTSELLSWLKSMFTETEEYTGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLSIPVNVNQATLEANIEQQEGVNDDEYATD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01989 484 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 90 449 - -
Vimu5g01989 484 Gene3D alpha/beta hydrolase 106 437 IPR029058 -
Vimu5g01989 484 Pfam alpha/beta hydrolase fold 169 433 IPR000073 -
Vimu5g01989 484 SUPERFAMILY alpha/beta-Hydrolases 117 443 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01989 Vimu-Chr5 31668260 31672069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01989 167 254 Acyl Lipid Metabolism Gene Families AT4G02340 31.183 5.01e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01989 - - gmx:100790561 840.106