Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01987 ATGGAGACAAGGAGAACTTGGAAACCGAATGTCCAGGAAAAGCGGCTCTTCAGCTACATCCTAGATCGTCACGTTCGTGTTAAAGTGACCACACATGCCATCCGATGCATAGACAAGGCAGGTGGGATTGATGAGTACTTGCTGAAAACTCCTTATCACAAGATGGACACTGAAATGGGCATTCTCTGGAAGGCAAAAATTGAGAAATTGTATGAAGAGCTTGGCCAAAAGGAGGTTGTATTCTTTTCACCTGAGGCTGAAGCGAAGTTTGAGCAGGACTTTAAAGATTTGAAACTGTCTGAAAGGGAAGCACAAAAGGAGGTCAGAAGAAAGATGTACACTGGGATGAGCAAGCACGAACGGGTTCCTATTTCGTATATCTTAGCTGCTGACAAGCTCAAAGCTGGAAGCGTTGTTTCTAATTAA 426 0.439 METRRTWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEELGQKEVVFFSPEAEAKFEQDFKDLKLSEREAQKEVRRKMYTGMSKHERVPISYILAADKLKAGSVVSN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01987 141 FunFam 54S ribosomal protein L24 1 54 - -
Vimu5g01987 141 Gene3D Ribosomal protein L28/L24 1 54 IPR037147 GO:0003735
Vimu5g01987 141 SUPERFAMILY L28p-like 2 55 IPR034704 -
Vimu5g01987 141 Pfam Ribosomal L28 family 3 40 IPR026569 GO:0003735
Vimu5g01987 141 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 3 120 IPR026569 GO:0003735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01987 K02902 - gmx:100791613 245.358