Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01986 GTGCAGGTTTTAAAACGGGTGGAAGTGAAGGTCAAATATCAAGAAGATTTGTGGGCCCTGAAGTTTCTTAATTTTATAAATGGTGTTAATCAATTACTGTTTGAAGGAATGACTCGTGAATTGCCAGTTATCAGAATAGGCTTTGCAGAAGATATATGGATGGTGGGAGTCATTGATGAGATTCGGATGCCATTAAATGAAAATGATCATAATCCAATACTAATTGACACAAAGACTCGCACTCGAGATACGCTTCCTGCTGAACCGCAACGAAGAAATGGAAGGCTTCAATTGATGTGCTACAAGTATTTGTGGGACAATTTGGTTGCTGATAATTTTCCTTCTAATATTTTTTTCACTTATTTTGGCTTAAACCCTCAACATAATCTATGTGAAGATCTAAAAGTGACAAATGCTGACTCTGGATTTTCTGCTTCGACTCTGGATGATGTGGTAAGATATTACAGAAATACATGTAGGATGCTGGCCCCTGCTCATGATCAGCTCTTGTTGAGATATGAGTATCAGAAAGATCATTCACTGCTTGGTGAAGATAAATTCACATATGATCATGACTGGCTAACGAATCAAATTCGCTCGTGTCTTGAGTTTTGGCTTGGAGAACAAGAAGCAACTTATCCTCCTGAAGATGAACGCTGGAAATGTGGTTACTGTCAATTTGCTCCTGTCTGTCCTGCATACAATGATAGTAAAGGAACGATGGGACCTAAAAGCAATGATTTAAACATTAAAGAAGGCTAG 762 0.3832 VQVLKRVEVKVKYQEDLWALKFLNFINGVNQLLFEGMTRELPVIRIGFAEDIWMVGVIDEIRMPLNENDHNPILIDTKTRTRDTLPAEPQRRNGRLQLMCYKYLWDNLVADNFPSNIFFTYFGLNPQHNLCEDLKVTNADSGFSASTLDDVVRYYRNTCRMLAPAHDQLLLRYEYQKDHSLLGEDKFTYDHDWLTNQIRSCLEFWLGEQEATYPPEDERWKCGYCQFAPVCPAYNDSKGTMGPKSNDLNIKEG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01986 253 Pfam Exonuclease V - a 5' deoxyribonuclease 69 133 IPR019190 GO:0045145
Vimu5g01986 253 Pfam Exonuclease V - a 5' deoxyribonuclease 161 231 IPR019190 GO:0045145
Vimu5g01986 253 Pfam Exonuclease V - a 5' deoxyribonuclease 2 66 IPR019190 GO:0045145
Vimu5g01986 253 Gene3D - 8 233 IPR011604 -
Vimu5g01986 253 PANTHER EXONUCLEASE V 2 238 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01986 Vimu-Chr5 31637670 31639818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01986 K17815 - gmx:100792136 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01986 5 31637670 31639818 Vimu5g01986 5 31637670 31639818 ECH