Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01964 ATGATGGAAAAGCAATGTGTCTATTCCTTCTCACTAGCACTGCTACTTTCATTTTTGTATTCCACCACCACTTTAGCCCAATTATCACCGGCTTCTGCTCCTCTTAAACCAGTTCAACCTACTCCTACTCCACCAGCTGAGGCTCCTAAACAGCCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATGCCACTCCCGACACTCCAGCTGTTGACATTGTTGGAATCCTGAGGCAAGCCAAGTCATTCAACATCCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACCACTAAGTCAGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTCAACTCAAACCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTTTCTAGCTCCAACTTTGATACTCTAACCAACCCTGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTAGAACTGAACGTGATAAGTTACGGAGGCAGTGTGAACATCTCAACGGGTGAGGTTAACACTACCATCACTGGCATTGTATACACAGATAAGCATCTTGCTATTTATAAGGTAGGGAAGGTGCTTCTTCCTATGGATTTTTTTACTGTTGCTAAAGCACCGGCAAAGGGACCATCTTTGGCACCAGAACCTTCAGCAAAGGCTCCTAAAGCTGATAAAGAGAAGTCTCTGCCTTCAGATTCCTCGGAATCATCCGAGATTAATGGCACAAATGATACTTCTGACACTGTGAAAATCAATCATGGAAAGTGGTTGTCACTTGTCCTTGGACCAATTCTCCTTATGATATTCTCATCATAA 876 0.4463 MMEKQCVYSFSLALLLSFLYSTTTLAQLSPASAPLKPVQPTPTPPAEAPKQPLVPSLPQSPSDATPDTPAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSQLKPGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKGPSLAPEPSAKAPKADKEKSLPSDSSESSEINGTNDTSDTVKINHGKWLSLVLGPILLMIFSS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01964 291 MobiDBLite consensus disorder prediction 32 66 - -
Vimu5g01964 291 MobiDBLite consensus disorder prediction 35 56 - -
Vimu5g01964 291 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Vimu5g01964 291 FunFam Fasciclin-like arabinogalactan protein 11 56 216 - -
Vimu5g01964 291 SMART fasc_3 112 217 IPR000782 -
Vimu5g01964 291 Gene3D FAS1 domain 56 216 IPR036378 -
Vimu5g01964 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 265 IPR045003 -
Vimu5g01964 291 Pfam Fasciclin domain 82 216 IPR000782 -
Vimu5g01964 291 MobiDBLite consensus disorder prediction 228 266 - -
Vimu5g01964 291 SUPERFAMILY FAS1 domain 64 217 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01964 Vimu-Chr5 31443408 31444987 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01964 - - gmx:100776667 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01964 5 31443408 31444987 Vimu5g01964 5 31443408 31444987 ECH