LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu5g01942	ATGGGTGGAAGAAAGTGGAGCATCTTGGTGGCCATCTTCATCTTGCTTATTGCCATGGAAGCTGCCATTGCTCAAGGTCAAGGCAAAGGCAATGGCAGTGAAAATGGTAATGGTAATGGAAAAGGTAATGGAACTGATAAGAAAGAGAAGGAGAAGGAAAAGAAGGAGAAAAAGCCAAAAGAGAAAAAGCAAAAGAAGCAACGTGATGAAGCCTCGGATTATGACAAGCTGTCAGAACTGCCATCAGGTCAAGAACGAGGGTTCTGCAGAAGAAACACCACCTGTGAGTTCAAGACCATTGTGTGTCCAACCGAGTGCGCAAAGAGGAAGCCCAAGAAGAACAAGAAGTCGAAGGCATGTTTCATTGACTGTAGCAGCAGCAAATGTGAAGCCACCTGCAAGGTAAGGAAAGCTAACTGTGATGGGTATGGATCTCTGTGTTATGATCCTCGTTTTGTGGGTGGTGATGGTGTGATGTTCTACTTCCACGGTGCCAAAGGAGGAAATTTCGCCATTGTTTCTGATGATGAGTTCCAAATCAATGCTCACTTCATTGGTACTCGACCGCAAGGAAGGACTCGTGACTACACATGGGTGCAAGCACTTGCTGTCATGTTTGACTCACACACTCTTGTTATTGCAGCCAAGAGAGTGTCTCATTGGAATGACAACGTTGATTCTCTCACAGTGAAGTGGGATGGTGAACTAATCATTGTTCCAACTGATGGAGAGGCTGAATGGAGGGCCAATGGAGATGAAAGAGAAGTGGTTGTGGAGAGAACCGACGAGACCAACACTGTGAGAGTGATGGTTTCGGGTTTGGTTGAGATGGACATAAGTGTGAAGCCTATTGGAGAGCAAGAAAACAAGGTTCACAATTACCAACTGCCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAGGTTTAAGAAAAGTACAGATCATTTTGAAGGAGTTTTGGGACAGACTTACAGACCAGGGTATGTTAGCCCTGTCAAGAGAGGGGTTCCTATGCCAATGATGGGTGGGGAGAACAAGTACGAGACTCCCTCTCTCTTTTCAACATCATGCAAACGATGCATGTTCAAGAGGCCATCTGAAATAGCAAACACAAAAGAATTAGTTGCTAAGTATTGA	1143	0.4488	MGGRKWSILVAIFILLIAMEAAIAQGQGKGNGSENGNGNGKGNGTDKKEKEKEKKEKKPKEKKQKKQRDEASDYDKLSELPSGQERGFCRRNTTCEFKTIVCPTECAKRKPKKNKKSKACFIDCSSSKCEATCKVRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALAVMFDSHTLVIAAKRVSHWNDNVDSLTVKWDGELIIVPTDGEAEWRANGDEREVVVERTDETNTVRVMVSGLVEMDISVKPIGEQENKVHNYQLPSDDAFAHLETQFRFKKSTDHFEGVLGQTYRPGYVSPVKRGVPMPMMGGENKYETPSLFSTSCKRCMFKRPSEIANTKELVAKY	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu5g01942	380	PANTHER	ROOT CAP DOMAIN-CONTAINING PROTEIN	5	372	-	-
	Vimu5g01942	380	MobiDBLite	consensus disorder prediction	28	42	-	-
	Vimu5g01942	380	Pfam	Root cap	308	364	IPR009646	-
	Vimu5g01942	380	MobiDBLite	consensus disorder prediction	27	79	-	-
	Vimu5g01942	380	MobiDBLite	consensus disorder prediction	43	79	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu5g01942	Vimu-Chr5	31316644	31317951	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu5g01942	-		-	gmx:100789697	608.986

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu5g01942	5	31316644	31317951	Vimu5g01942	5	31316644	31317951	ECH