Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01934 ATGGCTACCTCTTACTTTCTATTGGGGCATGTTGGCAGCTCATTGGAAGCGGTTAACAGGATTTATGAGATCAAAGGTCGTAGACATACAAGTCCTCTGGCTATTTGTGTTGGCGACGTATCAGACATAACCCGTTTTGCTGTCACTGACCATTTACCTCATGGTCTGCTTGATTCCCTCCTACCTGGGCCTGTTACAGTTGTACTAAAACGAGGTTTGTCAGTCATGTCTGAGAGAGAGTCAAGTGTTCTTGAACGATCTTTGAACCCAGGATTGGATAGCATAGGAGTTAGAGTGCCTGATTGCAATTTCATCAGGGCCATTGCCCGTGCTTCAGAAACTGCTCTAGCCCTCACCAGTGCAAACTTAAGTGGACAGCCAAGTAGTCTTTCCACCAAAGATTTTGAGAACCTCTGGGAACACTGTGCTTTTGTTTATGATGGTGGTTTGATTCCATCAAGTCGAGCTGGTTCTACAGTTGTGGACCTCACTACACCACAAAGATACAGAATACTTAGACCTGGAAGGTAG 531 0.4539 MATSYFLLGHVGSSLEAVNRIYEIKGRRHTSPLAICVGDVSDITRFAVTDHLPHGLLDSLLPGPVTVVLKRGLSVMSERESSVLERSLNPGLDSIGVRVPDCNFIRAIARASETALALTSANLSGQPSSLSTKDFENLWEHCAFVYDGGLIPSSRAGSTVVDLTTPQRYRILRPGR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01934 176 Gene3D DHBP synthase 2 176 - -
Vimu5g01934 176 Pfam Telomere recombination 13 175 IPR006070 GO:0003725
Vimu5g01934 176 ProSiteProfiles YrdC-like domain profile. 1 176 IPR006070 GO:0003725
Vimu5g01934 176 FunFam YrdC N6-threonylcarbamoyltransferase domain containing 3 176 - -
Vimu5g01934 176 SUPERFAMILY YrdC/RibB 10 176 IPR017945 -
Vimu5g01934 176 PANTHER SUA5 13 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01934 K07566 - gmx:100791087 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01934 5 31232755 31233505 Vimu5g01934 5 31232755 31233505 ECH