Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01921 ATGTACAAAAACCAGCTTCAGGAGCTGGCACAGCGAAGCTGCTTCAACCTGCCTTCCTACACGTGCATTCGGGAAGGTCCTGATCACGCGCCGCGTTTCAAGGCCACGGTTAACTTCAACGGCGAGATCTTCGAGAGTCCTCAATACTGCTCCACGCTCCGTCAGGCCGAGCACTCCGCCGCCGAGGTCGCGCTCAATTCGCTCTCCAACCGTGCTCCCTCTCACTCCCTCGCCGCCAGGATCCTCGTGAGTTTCTCTCTCCATCGCTGCTTTTTTTCTTCTGTTTGTGAAATTACCCAACTATCCTCGCTCTGTGAACTTTGCCGTTTTGCCTCCGTTTGTTGTGCAATGCCGTTTCGCCTTCGTTTGGTTTTTGAATTTAAGGTTATTGGTGAACTTTGA 402 0.5274 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSAAEVALNSLSNRAPSHSLAARILVSFSLHRCFFSSVCEITQLSSLCELCRFASVCCAMPFRLRLVFEFKVIGEL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01921 133 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Vimu5g01921 133 SMART DRBM_3 2 69 IPR014720 -
Vimu5g01921 133 FunFam Double-stranded RNA-binding protein 2 1 70 - -
Vimu5g01921 133 SUPERFAMILY dsRNA-binding domain-like 2 69 - -
Vimu5g01921 133 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Vimu5g01921 133 Gene3D - 1 69 - -
Vimu5g01921 133 PANTHER - 1 82 - -
Vimu5g01921 133 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01921 Vimu-Chr5 31125888 31126289 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01921 - - zju:107411375 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00634 4 4761942 4762733 Vimu5g01921 5 31125888 31126289 PCT