Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01917 TTGACCCACGTAATCACTTCCAGAAAACGCGATCCCGCATCCTCCACCGACGAAACGAAGCAGTTCTCCGTTGACGTGAAAATCCGTCACGGACGCTTTGATTCGACCGAATCTATTGTGTGTAATTTTTATGTGGAACACTTTATTATACCTGGTGAAAAGAAAATGGGGTTAAGCCTTTCAAAGCTCGTGATGATTATATTGTTAATATTTCTCAGCTTCTCTGTAGCATACTCATCTACTGCAATGCACACTAATAATTGGGCTGTTTTGGTCTGCACTTCTCGCTTTTGGTTTAACTATCGGCATATGGCCAATACTCTGTCCTTGTATAGAACAGTTAAGCGACTAGGAATACCCGATGAGAGGATTATACTCATGCTAGCAGATGACATGGCATGTAATGCGAGAAACAAGTACCCTGCCCAGGTTTTTAATAATGAAAACCATAGACTTAATCTCTATGGGGATAATGTGGAGGTAGACTATCGTGGCTATGAAGTGACAGTGGAAAACTTCTTACGGGTACTTACAGGACGTCATGAGACTGCTGTTCCGAGGTCTAAGCGACTTCTTAGTGACGAAGGAAGTCATATTCTTCTGTACATGACAGGGCATGGAGGTGATGAGTTTTTGAAATTTCAGGACTCAGAAGAGCTTCAAAGTCATGATTTAGCTGATGCCGTGAAGCAAATGAAAGAGAAACGCAGGTTCAAGGAGCTTCTGATAATGGTGGACACCTGTCAAGCCTCTACTCTGTTCTCCCAGCTTCATTCACCAGGTGTTTTGGCAATTGGAAGTAGTATGAAAGGAGAAAATTCATATTCGCATCATTTGGACTCAGATATTGGTGTTTCAGTCGTTGATCGTTTTACATTTTACACCCTTGCTTTCTTTGAGAGGCTGAATATGTATGACAATGCTTCGTTAAGCAGTCTTTTCAAGTCATTTAATCCAAATTTGTTGATGTCAACTGCGTACTATAGAATGGATCTATACCAACGCCATTTAGAGGAGGTCCCTGTGACAAACTTCTTTGGTTCTGTAATGAAAACTATACATACAGATTCAGCCTATAGATCTCTGTCTAATAAAAAAAATGGGACAGATAAAACGAGAATCTCTTTGGAACAATCAATCTCTGACAATGAGAGAATGATTTTGATAAACTCAGATGCGGAGGATCAATATAATAATTTAACTGCGGAGGAACATTTCCAAGATGGAGTTAGACAAATATGGACAGCTATTCTTGGCAATACTTCTGAAAGCATCGACACTTTTGTGTGCTATGGATTGATTTTAATGCTTCCTTTGTTGATATTTTCCACGTGGTTGTCAAAGTAA 1347 0.3987 MTHVITSRKRDPASSTDETKQFSVDVKIRHGRFDSTESIVCNFYVEHFIIPGEKKMGLSLSKLVMIILLIFLSFSVAYSSTAMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRRFKELLIMVDTCQASTLFSQLHSPGVLAIGSSMKGENSYSHHLDSDIGVSVVDRFTFYTLAFFERLNMYDNASLSSLFKSFNPNLLMSTAYYRMDLYQRHLEEVPVTNFFGSVMKTIHTDSAYRSLSNKKNGTDKTRISLEQSISDNERMILINSDAEDQYNNLTAEEHFQDGVRQIWTAILGNTSESIDTFVCYGLILMLPLLIFSTWLSK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01917 448 Pfam Peptidase C13 family 87 321 IPR001096 GO:0006508|GO:0008233
Vimu5g01917 448 PRINTS Hemoglobinase (C13) cysteine protease signature 162 177 IPR001096 GO:0006508|GO:0008233
Vimu5g01917 448 PRINTS Hemoglobinase (C13) cysteine protease signature 189 208 IPR001096 GO:0006508|GO:0008233
Vimu5g01917 448 PRINTS Hemoglobinase (C13) cysteine protease signature 113 142 IPR001096 GO:0006508|GO:0008233
Vimu5g01917 448 PRINTS Hemoglobinase (C13) cysteine protease signature 88 112 IPR001096 GO:0006508|GO:0008233
Vimu5g01917 448 PRINTS Hemoglobinase (C13) cysteine protease signature 238 254 IPR001096 GO:0006508|GO:0008233
Vimu5g01917 448 Coils Coil 383 403 - -
Vimu5g01917 448 FunFam putative GPI-anchor transamidase 84 361 - -
Vimu5g01917 448 Gene3D - 84 363 - -
Vimu5g01917 448 PIRSF GPI8 55 441 IPR028361 GO:0003923|GO:0016255|GO:0042765
Vimu5g01917 448 PANTHER GPI-ANCHOR TRANSAMIDASE 77 357 IPR028361 GO:0003923|GO:0016255|GO:0042765
Vimu5g01917 448 PIRSF Legumain 58 423 IPR001096 GO:0006508|GO:0008233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01917 K05290 - gmx:100794836 676.396