Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01912 ATGGATCCTACTCTCAAGCTCTGCGCCTTCTTCCTCGTTCTTGTCGGATTAGTGAACGGTTCTTTTGCGGAAAATGATTTTGGACAGTGCGAAAGCGTTGTTAAGAGATGGACGCGTACTTCGCTAGATGAGGAAACGACAAAAGAGGATAAACATATGCTGAGGGATTTGCTGTTTTTCTTGCATGTTCCTCGAACGGGAGGGAGAACGTATTTTCACTGTTTTTTGAAAAAGTTGTATCCCAGCTATCTGGAGTGTCCTCGCTCTTATGATAAGTTGCGCTTTGATCCAAGTAAACCAAAATGCAGGCTGTTAGTTACACATGATGACTATAGCATGACATCCAAACTTCCAAGGGAGAGAACTTCTGTTGTTACCATACTCAGGGATCCAGTTGATCGTGTATTTAGTACGTATGAATTTTCAATAGAGGTTGCAGCTAGATTTTTGGTGCATCCAAACTTGACCTCTGCAACAAAGATGGCTCTACGCTTAAGCTCTAAGACTAAAGGAGTAAGCACACTGGATATATGGCCGTGGAAGTATCTCGTTCCATGGATGAGAGAAGATCTATTTGCTAGGAGAGATGCCAGGTATAGTAGGGGACAGAATATCAGTGAGAGCAATGATTCTTATGACATGGAAGATTTTGCAATGCCATTACAAGAATACATCAATGATCCTGTGGCTGTGGATGTTGTACATAATGGAGCCACATTCCAGGTTGCAGGTTTGACAAACAATTCTTATACAGCAGAGGCACATGAAGTGCGCCATTGTGTACAGAAATACAAAACTCTCGGTAAATATGTGCTACAAGTTGCAAAGCACTATAACGACTCATGCTTGTATATATTGCAGAAGAGACTGGATGATATGTTGTACGTTGGTCTAACAGAGGAACACAGAGAATCTGCAACGAAATTTGCAAATGTGGTTGGTACTCAAGTGATATCACAGCTCAATGCCCCGAAGTCTAGCCTAGAAACTACTGATAATACAGAAAGAAGTTCATTTTCGAATTCTGATCCGGATAGTATTGAACATCAGAATAGCACCTTGAACAGGGAAGGAAGTGAGGTTACTTCAAGTGAAGGGGGAGAAGCAACAGAATCTAATATGACTGTTGGAGAACTAATGGATGCTTATGAACTCTGTATTGCCAATTTACGGAAGGCTCAGTCACGCCGACGAATATATTCCTTGAAAAGGATTTCTCCAGTAAACTTTACAAAGGAGGCACGTCTTCAGGTTCCTGAAGAGGTTCTCCATGAGATACGATCTCTTAATGACCTCGACTTGCAGCTCTACGAATATGCAAGAGTCATTTTCAATAAACAACATAAAACGTCGTTGCTGATTAATGAGGATAGTTGGGACAACTTTAGCACTGCATATGGCCTCTGGAGGGTCGTTACACTAGCAATTTCTTTTGTCTTCTTCTTTTTCATATTCTTACTAATTGTAAACGCGAGAAGAAGAACGTGGAAAGTTAAGAAGTGA 1503 0.4112 MDPTLKLCAFFLVLVGLVNGSFAENDFGQCESVVKRWTRTSLDEETTKEDKHMLRDLLFFLHVPRTGGRTYFHCFLKKLYPSYLECPRSYDKLRFDPSKPKCRLLVTHDDYSMTSKLPRERTSVVTILRDPVDRVFSTYEFSIEVAARFLVHPNLTSATKMALRLSSKTKGVSTLDIWPWKYLVPWMREDLFARRDARYSRGQNISESNDSYDMEDFAMPLQEYINDPVAVDVVHNGATFQVAGLTNNSYTAEAHEVRHCVQKYKTLGKYVLQVAKHYNDSCLYILQKRLDDMLYVGLTEEHRESATKFANVVGTQVISQLNAPKSSLETTDNTERSSFSNSDPDSIEHQNSTLNREGSEVTSSEGGEATESNMTVGELMDAYELCIANLRKAQSRRRIYSLKRISPVNFTKEARLQVPEEVLHEIRSLNDLDLQLYEYARVIFNKQHKTSLLINEDSWDNFSTAYGLWRVVTLAISFVFFFFIFLLIVNARRRTWKVKK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01912 500 PANTHER HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 8 450 IPR010635 GO:0008146|GO:0016020
Vimu5g01912 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 148 IPR027417 -
Vimu5g01912 500 Gene3D - 54 357 IPR027417 -
Vimu5g01912 500 MobiDBLite consensus disorder prediction 324 373 - -
Vimu5g01912 500 MobiDBLite consensus disorder prediction 324 371 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01912 K22218 - gmx:100810026 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01912 5 31015114 31020029 Vimu5g01912 5 31015114 31020029 ECH