Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01911 ATGGGTTTTGGTCGAACTTCGACCTCGAGAAGTGGAGATTACTTGGAAGGGATGCTTAATGACTATGTTGGAGGAAGAAACAAAGTGAAGGCTCAGAAAGTTTCGTCCACAAAGTTTGTTGCAGCACTCACTTGTCTTCAGTTTTTCTTTGCAGTTTATGCAACATTCCTATTGTATTACATGGGGCCTTCCATTGATTTAAGAACCAAACCAGAGTTCACATGGGCTACCAAAATTGCACAACAGTGGAAACAACTTATGATCACACCCCACGTTATTGGCCGCTACCAAGAAGCTGCTTCCTCTCTCGTCATGGAGGGTGTTCTTCCCACAAGTCCGTCACAAGTGTGTGAGAATGAGAAGATAGACTTCCAGCAAAAGAAGTCTAATGATGTCCAAATGATCAAGTTAAAGAGAGATTTATACGATGAGGTGTTGAACTTCCAAAGCAAAACATTTGGCACTGAGACTCTTCAGGAGCTGATGGCAATGAAATCTAAATGGGACTTGAAGGGTCCAAACAGCCCAAAAATCACTGTGTTGCTGAACCACTTCAAGAGAAAGACACTCTGTGCTCAGCTTGATTCTTTGCTACAACAGACCCTTCCTTTCCATCATGCTTGGGTTCTTTCATTTGGGAGCCCCAATGAGGCCTCATTGAGGAGAATTGTGGAGACCTATAATGATTCAAGAATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAAGCTGATCTTGTGTACGTTATTGATGATGACATGATTCCTGGAAGGAAGATGTTGCAGATTTTGGCGCACGTGGCTGGGACAGAAAAATACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATTTTGCCTTTTAGACAGAAGGATTTCACGTTTCCAAGTTACAGAAAATTTCGATCTAAGGAAGCAGGGTTGTATTTACCCGATCCTGCTTACGATATCACAGTTGATAAAATTGTGCAGGTGGATTTTCTATCTAGTTCATGGTTTCTCTCTGCTGATCTTGTTAAGACACTGTTCTTTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTTCACCTCAGCTATCAGCTTCAGAAGTACAAAAATGCTGGCTCCTTTGTTCTTCCAGTAGACCCTAAGGACAAGGAAACTTGGGGAGATAGTGAACACAGGCTTGCATATGTATCTGAAACCACAGTGATTTTCAAGGACATAGTTCAGGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACTGGTTATGTGACTCAGTGGGCTGCGATGTACCCACAAAAAGTTGATGCACTCTTCTATGCTCACTCGGTTGATGAAGTGAAAGTGCTGGCACCACTTCTTGAAAAATTTAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAGTTTCTGCACTTGTGAAGATGCTGCAACAGCTCTCAAATGGCCTACAATGGTCTGCAAAGAACGTCGATTCAAGATTTTTGATTTGGCCATTGGATCACTTTCTGGGGTATCAGACTCAGAGGCACCAGTGATACACGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTAGTGATCACTGTTGCTGACATTAACCCTCATGTGAGAAAAGCTCTTAAGATGGCCTCAGAAACCAACTCAAATGCTACCACATTGGTTCTTTTACCCAGGGCATCAGTGTCTCAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGATTTCTGTGAACATCATCACCCAAAACAGAGCCAATTCACTAACAAGGCTTCTGAAATCTCTAAGCAATGCCTACTATCTTGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAGGGTAGATGAAGAAACTATAAGAGTAGTAGGTTCATTTGAGTGGCCTCATGGACCCAAAACCCTGAGAAGGAGAATAATCCAAGGTGGTCTCATTCGTGCTGTGAGTGAAAGTTGGTATCCATCATCAGATGATGACTTTGGTCTCCTACTGGAAGATGACATTGAAGTTTCCCCTTATTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCTCAAGTTTCTCTCCCAGAGCTCTCCTCCATCTCCCTCTACACTCCAAAGCTTGTTGAAGTTGTCAAAGAGAGACCAAAATGGAATGCCACAGAATTCTTCAAACACATTCACCCCAACACACCTTACCTTCACCAATTACCATGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAATCCAACCCTGTTCAAATTCCAAAATCTAGAACAAATGGATGGCAGGCTTCATGGAAGAAGTTCCTGATAGACATGATGTACCTCAGAGGGTATGTCAGTCTCTACCCAAATTTCCCTCAACAAGCAAGCTTTTCAACCAACCATATGGAGCCAGGGGCACATATCAGTGCAAAAGACAACGTTGTTAAGCATAACATACAGGACTTTGAGGTGCCACTATTGAAAGAAGACTTCCGAAACTTGTTGCCAGCAATGAAGATGCCTCCAGCATCAAAGCTCCCATCTTTAAACCTCTTCAATCAACCAGTTTCTCTGAAGGGTCTCAAAGCTGCTGGAGCTAAGCTGGGACAGGATGTGCTGAGATGCAACAATGTCACTGAGGTTGTGGCTGTTGATCAAGACACGGGTATTCCTCGTACCTGCTCCAAATTCTGA 2799 0.4348 MGFGRTSTSRSGDYLEGMLNDYVGGRNKVKAQKVSSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVIGRYQEAASSLVMEGVLPTSPSQVCENEKIDFQQKKSNDVQMIKLKRDLYDEVLNFQSKTFGTETLQELMAMKSKWDLKGPNSPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVETYNDSRISFISSSYDFKYYGRFQMALQTEADLVYVIDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFFETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKVDALFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGSFCTCEDAATALKWPTMVCKERRFKIFDLAIGSLSGVSDSEAPVIHAVYTSMKGLIKIHNPSVVITVADINPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRISVNIITQNRANSLTRLLKSLSNAYYLGDEIPITFNMDSRVDEETIRVVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNIQDFEVPLLKEDFRNLLPAMKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNVTEVVAVDQDTGIPRTCSKF 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01911 932 SUPERFAMILY Nucleotide-diphospho-sugar transferases 596 787 IPR029044 -
Vimu5g01911 932 CDD Glyco_tranf_GTA_type 188 279 - -
Vimu5g01911 932 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 598 847 IPR029044 -
Vimu5g01911 932 PANTHER OSJNBA0004B13.7 PROTEIN 280 923 - -
Vimu5g01911 932 SUPERFAMILY Nucleotide-diphospho-sugar transferases 176 376 IPR029044 -
Vimu5g01911 932 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 160 385 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01911 Vimu-Chr5 31000878 31006004 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01911 - - gsj:114374559 1774.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01911 5 31000878 31006004 Vimu5g01911 5 31000878 31006004 ECH