Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01884 ATGGATGAACAATCTGTAGGTGCGATGGGTGAGGTGGGGAAGATACTCTACATAGTGGTGGTGGATGACGCGCAAAAGAAAGAGTCATTTCGTTACACGCGCCCCGTTCTTCAGAGCACGCTCCAGCTTATGGGATGCAAGGCTCGTCACGCCTTCAAGATCAGCCAAAGAGTTTTTGAACTCACAAGGAAAGCAAATTCTACTGATATTTTGCAGCCAGAAATAGAGGCTTTATCAGGTTTTGATGCTTTCAAGGGTAATCCTCTGAAGAAAGAGGGTCATGATGCTGATGCTGGCCTGGATATAGCAGACTTACGCAACCAATTGCTTTCTGGGAAAGATTATAAATTTAAAAGTGTACCTTTTGAGTTGTACAAAAGGCGCACATCTGCATTCATCCGACGAGAAAATTTTCTAGATATTGTCTGTGATGCCCTGTCAGAGTACAAGTATGTGGGTCCTAACCAGAGAGCAGACTTGGTCTTAGCCTGCAGGATCCGTGAGCGCAAAGAGTCTGTGACAGTGCTATTGTGTGGCACAAGTGGCTGTGGCAAATCCACGTTGTCTGCATTGCTGGGTGGTAGGTTGGGAATCACAACAGTGGTATCAACTGATTCTATTAGGCACATGATGAGAAGTTTTGCTAATGAGAAAGAAAACCCCTTGCTGTGGGCTTCTACATACCATGCTGGGGAGTGTTTGGACCCTGTCGCTGTTGCAGCAGCAAAGGCCCGAAGGAAAGCAAAAAAGCTGGCTGGTGTGTCACATTCACTTCCGAAGGATGAAGGAACTGAGGGTAACAATTCTAGCAAATCTGATAATAGGATGTCAGAGACTAACTCTGCTCCTACTGAACTGCTAAGTCCCAAACAAATGGCTATTGAAGGATTCAAGGCACAGAGCGAGATGGTGATTGACAGTCTCGATAGGCTCATCACGGCATGGGAAGAACGAAAAGAGTCTGTAGTTGTCGAGGGTGTTCACTTGAGCCTCAACTTTGTTATGGGACTTATGAAAAAACATCCTTCAATCATACCGTTCATGATACACATTACAAATGAGGACAAACACTTGGAGAGATTTGCTGTACGTGCGAAGTATATGACACTGGATCCAGCTAAAAACAAGTATGTGAAGTATATTAGAAACATCAGAACAATCCAGGATTACCTCTGCAAGCGTGCTGAAAAGCATTTCGTTCCCAAAATAAATAACACAAATGTTGACAAGAGCGTGGCAGCCATCCATGCGACTGTATTCAGTTGTCTTAGAAAGCGTGAGATGGGAGAACAGCTATATGATCCTGTTAGAAATACTGTGTCAGTTGTTTATGAGGAATATAGAAATCAATGTTCAGCAAATGCTTTGACCGCCAAAGGAATGCTTCAGTTGATCCAAAGACAAGGTTCTTCAAGGAATCTAATGGCTCTTGTTAATACTGATGGGTCTGTAGCAAGGGCTTGGCCTGTTAATTTAGTTGACAGTAATGGGAAGCCTGTATGGTGCCATGGACCAGAGAATGGAATTTGTCATCCAATGTATGGTCCCTTAAGAATTGGGAAGGCAGAACCGGTAAATCTTCAGTTTGGTCTTTACGGAATCAGTGCTTGGCCCAGTGATGGTGGCACTAGTCGTGCTGGAAGTGTAGATGAGTCTAGAGCCGATGGAACTGATACCGGTAGTAGATATGTATCCTCTTGCTGTAGCTCACCAAGGATGTCAGATGTCGCTTCAAAAGAGCTCAAAGAGGACTTCTCAGTGCATGGTAGTGATGAGGAGATTGACGATCAACCTGAGGTTGGAAGTGATGAAGATTTCAGTGATGAGCCCGACAAACATGCCCATGAAGAGGTAGGATCAGTTGACGAGGAATCAACAAAATCTGATGAGGAGTACGATGATCTTGCAATGCAAGACGTGGTGGAAAATGGGTATTGGTCGGACGATGATGATGAGTTTAGGAGTAAGGTTGGTCTTGTTGGCGGGGAGTTAGGAAGCAAAATGCATGGGGGAAACAGGTATCGTAGAAACCTGGATCTTTTCCATAGAAGTAGAAGTGAGCCAGTGGCAGTTCCTGAGCCACAATGCTCTTATTCTTCTCTGCTCGTTGAAAAGAACGAGAGGAAAGCCAAATTAAGAACACGTTCCCTTAGTATTCCTGCATTAGGAAAACACAGACCAGCAATGAATGATCCTATCCTTTCTGGTGCTCCTCAGAGGTAG 2223 0.4453 MDEQSVGAMGEVGKILYIVVVDDAQKKESFRYTRPVLQSTLQLMGCKARHAFKISQRVFELTRKANSTDILQPEIEALSGFDAFKGNPLKKEGHDADAGLDIADLRNQLLSGKDYKFKSVPFELYKRRTSAFIRRENFLDIVCDALSEYKYVGPNQRADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGGRLGITTVVSTDSIRHMMRSFANEKENPLLWASTYHAGECLDPVAVAAAKARRKAKKLAGVSHSLPKDEGTEGNNSSKSDNRMSETNSAPTELLSPKQMAIEGFKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIHITNEDKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHFVPKINNTNVDKSVAAIHATVFSCLRKREMGEQLYDPVRNTVSVVYEEYRNQCSANALTAKGMLQLIQRQGSSRNLMALVNTDGSVARAWPVNLVDSNGKPVWCHGPENGICHPMYGPLRIGKAEPVNLQFGLYGISAWPSDGGTSRAGSVDESRADGTDTGSRYVSSCCSSPRMSDVASKELKEDFSVHGSDEEIDDQPEVGSDEDFSDEPDKHAHEEVGSVDEESTKSDEEYDDLAMQDVVENGYWSDDDDEFRSKVGLVGGELGSKMHGGNRYRRNLDLFHRSRSEPVAVPEPQCSYSSLLVEKNERKAKLRTRSLSIPALGKHRPAMNDPILSGAPQR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01884 740 MobiDBLite consensus disorder prediction 261 285 - -
Vimu5g01884 740 Gene3D - 174 419 IPR027417 -
Vimu5g01884 740 MobiDBLite consensus disorder prediction 606 622 - -
Vimu5g01884 740 MobiDBLite consensus disorder prediction 251 285 - -
Vimu5g01884 740 MobiDBLite consensus disorder prediction 576 595 - -
Vimu5g01884 740 MobiDBLite consensus disorder prediction 558 573 - -
Vimu5g01884 740 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 13 647 - -
Vimu5g01884 740 MobiDBLite consensus disorder prediction 540 631 - -
Vimu5g01884 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 425 IPR027417 -
Vimu5g01884 740 MobiDBLite consensus disorder prediction 717 740 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01884 - - gmx:100776549 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01884 5 30669971 30674866 Vimu5g01884 5 30669971 30674866 ECH