Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01860 ATGGCAGCCACAGCTTCCTTACATCGTCTTTCTCGTCTTCGATTCTTAGCAAATTCCCAACCCCTTCTATCACCTTTTTCAATTCCATCCTATTTCTCTCTCACCCCCAAAACCAAGAAATCGAATCGATTGCGATTCTTTTCAATGGCTTCGGAACCCAAGGAATCGCCCGCCAACAACCCCGGTCTGCATGCAACTCCGGACGAAGCTACCAAGGGTTACTTTATGCAGCAAACTATGTTTCGAATCAAGGACCCCGAAGTGAGCCTTGATTTCTATACTCGCGTCTTGGGCATGTCTTTGCTTAAGAGGCTGGATTTTCCGTTCATGAAGTTCAGCCTGTATTTTTTGGGCTATGAGGATACGTCAAAAGCTCCAAGTAATCCAGTTGATAAAACGGTTTGGACCTTTTCCCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGATACCACAATGGAAATTCTGAACCTCGCGGCTTTGGACACATTGGCATAACTGTTGATGACACAGTAAAGGCATGTGAAAGATTTCAGAGTCTGGGAGTTGAGTTTGTTAAGAAACCAGATGAAGCATCTTCAAATGATGCCGCGAATCTTTCCCACCAGCTTTGTATCCATGACCGTCTGTCCTCTTCTAGTGCTGTTGTTCTACCACCAACACACTGTTCTGCTCTGTCTCAGAGTCATCATTGTCATCACCCCAACACTACCCGTGTTTTGAAGCCATCTTGGAGTTGCCAGATGCATTATGTATGGGACCCTTTATTGGTGGAGCACAGAAAGAGCAATACAGTATCACGAAAAGAAAAACTACAGAGAATAAGTATTATTGTGTGGCTACCCAAAGAGACCATATACTCACAAGTTTTGAGACTTTTCCAGCATTACTACTACTGCTTCAAATATCACTGCCTAGTTTTCTTTATTTTTGAATTATTTTCTGCAGGGAAAATGAGAGGTATAGCATTTATCAAGGACCCTGATGGATACTGGATTGAAATCTTTGATCTAAAAGGAATAGAAAATGTAACTCAAGGCCGGGGTCTTGGTTGGATTAAGACTGAAAAACGCATTCTAGAATTGAAGGAGAAGTACTCCAAGAATCTTAGGGGTGTAGTAAAGTTCAAACTTTACCATAGGAAAGAAGCTGCCACTGTTGACATTACAATTCCCACTAATGTGAAAGTGCCACTGCAATACTTTTCCAATGGTATTGATTTG 1251 0.4205 MAATASLHRLSRLRFLANSQPLLSPFSIPSYFSLTPKTKKSNRLRFFSMASEPKESPANNPGLHATPDEATKGYFMQQTMFRIKDPEVSLDFYTRVLGMSLLKRLDFPFMKFSLYFLGYEDTSKAPSNPVDKTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTVKACERFQSLGVEFVKKPDEASSNDAANLSHQLCIHDRLSSSSAVVLPPTHCSALSQSHHCHHPNTTRVLKPSWSCQMHYVWDPLLVEHRKSNTVSRKEKLQRISIIVWLPKETIYSQVLRLFQHYYYCFKYHCLVFFIFELFSAGKMRGIAFIKDPDGYWIEIFDLKGIENVTQGRGLGWIKTEKRILELKEKYSKNLRGVVKFKLYHRKEAATVDITIPTNVKVPLQYFSNGIDL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01860 417 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 228 IPR037523 -
Vimu5g01860 417 Gene3D - 51 218 IPR029068 -
Vimu5g01860 417 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Vimu5g01860 417 CDD GlxI_Zn 76 207 - -
Vimu5g01860 417 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 201 IPR004360 -
Vimu5g01860 417 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 66 200 IPR029068 -
Vimu5g01860 417 ProSitePatterns Glyoxalase I signature 2. 163 179 IPR018146 GO:0004462|GO:0046872
Vimu5g01860 417 NCBIfam lactoylglutathione lyase 76 207 IPR004361 GO:0004462|GO:0046872
Vimu5g01860 417 Gene3D - 266 348 IPR029068 -
Vimu5g01860 417 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 34 352 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01860 326 354 Calmodulin-binding Proteins AT1G08110 79.310 1.69e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01860 K01759 - gmx:100779383 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01860 5 30464406 30469772 Vimu5g01860 5 30464406 30469772 ECH