Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01850 ATGGAGAAGGTGATGAACATTCTGAAGCCGAAGCCAAATCCGCAACAACTATTGAGGGATTGGCAGCGCAGGCTTCGTCAGGAGTGTCGCAACATTGAGCGCCAAATTCGCGATATACAGAGAGAAGAAAAAAGTGTGCAGAAGGCGATCAGAGAAGCTGCAAAGAGGAATGACATGGGCTCCGCAAAGGCACTTGCCAAGGAACTTGTGAGATCTAAGAAAACTGTTAACCGTCTTTATGAAAATAAAGCACAAATGAATTCTATATCGATGCACCTTGGAGAGAGCGTTGGAGAGAGGTATCGGGATGTTAATCTAGTGTTCAAAATGCTGATGGTTTTTGGTTTTGCCTTGCGGGTTGTTCTTTGGAGGTACCGGGATGTTAATCCAGTGTGCACAATTTACCCTCCATCAACCTAG 420 0.4524 MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKSVQKAIREAAKRNDMGSAKALAKELVRSKKTVNRLYENKAQMNSISMHLGESVGERYRDVNLVFKMLMVFGFALRVVLWRYRDVNPVCTIYPPST 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01850 139 Coils Coil 18 56 - -
Vimu5g01850 139 Pfam Snf7 21 93 IPR005024 GO:0007034
Vimu5g01850 139 Gene3D - 9 100 - -
Vimu5g01850 139 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 7 98 IPR005024 GO:0007034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01850 K12193 - gmx:100797244 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01850 5 30394002 30395524 Vimu5g01850 5 30394002 30395524 ECH