Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01845 ATGAGCATGCCAGCGGAGAAAATGGCGAAGAAATCCATCGGAAGCTTAATGCGGAAGAAGCTTTCTGACATCACCAACAACGCCAACAACGCTCCCTCCCAACAACTTCACTCCTTTCCCTCTGACAACAATTCCATTCAACAACTCCTCAAGGAAAGAACGGCGTTGATCCAACTCCTTGCGGAAAGAAACAAAATGATTGAAGTGACTGGCGCGGAGCTGCAGAGGCTGAGAGGCGATGTGAAGAAGCTGCAACTCCAAAATTGGAACCTCGCGCAGTCAAATAGTCACATGTTAGCGGAGCTTAACATGGGGAGGGAAAGGATTAAAACTCTGCAGCATGAAATTTTGTGGAGGGCTGCTTTGATCAAAGGAAAGAACATGAATGTGCAGGATAAAGGGGAGATTGACTGCGGAGAGAATCCTACCTTATCAAAGTTACAGGAAGGAGATGAAAAGACAGTGCAGCTATCTCCCGAAGACAGCAATGATGAACAACGCAAATGTATGAATAGAAGACGGATAAGGACTACCGTTTCTTCAACTGCTTCGAAGAATAAAGGCAAAGACAAGGCTAAAGAAAATAGGAGACGTTTGAGGAGACATTCTACAACGTTCAAAACCCATGAACATGAACCTCTAGAAAATTTGTTCGAGTTAGAAGATGCATATCTTGTCACTCAATCTGTACCTAACAAGATGAGATCTCCAACTTCAAAAACTGAAAAAGGAGAAAGCTCTGATGATTTAAGGAATAAAGCTTCAAGATGTTCTTTCGGAAGACCCTTGCGAAGAGCAGTTCAAAAGGTTCATTCGTACAAGGAGGTTCCGGTAAATGTCAAACTGCGAAGATTAGATTAG 861 0.4321 MSMPAEKMAKKSIGSLMRKKLSDITNNANNAPSQQLHSFPSDNNSIQQLLKERTALIQLLAERNKMIEVTGAELQRLRGDVKKLQLQNWNLAQSNSHMLAELNMGRERIKTLQHEILWRAALIKGKNMNVQDKGEIDCGENPTLSKLQEGDEKTVQLSPEDSNDEQRKCMNRRRIRTTVSSTASKNKGKDKAKENRRRLRRHSTTFKTHEHEPLENLFELEDAYLVTQSVPNKMRSPTSKTEKGESSDDLRNKASRCSFGRPLRRAVQKVHSYKEVPVNVKLRRLD 286
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01845 286 Coils Coil 67 87 - -
Vimu5g01845 286 Coils Coil 282 286 - -
Vimu5g01845 286 Pfam Shugoshin C terminus 260 284 IPR011515 GO:0000775|GO:0005634|GO:0045132
Vimu5g01845 286 PANTHER SHUGOSHIN 2 213 284 IPR044693 GO:0000775|GO:0034090|GO:0045144
Vimu5g01845 286 MobiDBLite consensus disorder prediction 229 257 - -
Vimu5g01845 286 MobiDBLite consensus disorder prediction 141 208 - -
Vimu5g01845 286 MobiDBLite consensus disorder prediction 153 172 - -
Vimu5g01845 286 MobiDBLite consensus disorder prediction 238 255 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g01845 Vimu-Chr5 30327427 30330357 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01845 - - gmx:100801538 417.927