Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01819 ATGGATGTTAAGGAATTCTCCGCACATGCTTCTGTTGTCAACGACCTTAGCTTTGACACAGAAGGTGAATATATTGGAAGCTGTTCTGATGATGGATCAGTTGTGATAAACAGCCTTTTCACTGATGAGAAATTAAAGTTTGATTACCATCGGCCAATGAAGGCAGTTGCCTTGGATCCTGATTATGCAAAGAAAATGTCCAGGAGATTTGTTGCTGGAGGTTTGGCTGGTCATTTATATTTGAATTCAAAGAAATGGCTGGGCTACCGTGATCAGGTTTGTCAGAATGTTTTAATACTTGAGATATCTATTCTCTACTCTACAGTACTTTCTGTTTGTTAA 342 0.386 MDVKEFSAHASVVNDLSFDTEGEYIGSCSDDGSVVINSLFTDEKLKFDYHRPMKAVALDPDYAKKMSRRFVAGGLAGHLYLNSKKWLGYRDQVCQNVLILEISILYSTVLSVC 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01819 113 SUPERFAMILY WD40 repeat-like 3 86 IPR036322 GO:0005515
Vimu5g01819 113 Gene3D - 2 85 IPR015943 GO:0005515
Vimu5g01819 113 PANTHER VACUOLAR PROTEIN SORTING VPS41 4 89 IPR045111 GO:0006623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01819 K20184 - gmx:100804711 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01819 5 30061185 30073925 Vimu5g01819 5 30061185 30073925 ECH