Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01813 ATGAAAAGTATGAGGTTTTCATGGTCGTTCTTGATTTCTTTTCTTCTTGCTTTGTTGCTTAATGTGAGCTATGGACAGCCTCTGGTACCTGCATTGTTCATATTTGGGGACTCTGTTGTTGATGTGGGCAATAATAATCACAAATTTACATTAATAAAAGCAGACTTTCTTCCTTATGGAAGAGACTTTGAGAATCACTATCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCCATAGACTTCACAGCTGAAGTTCTTGGATTTACATCTCATCCCCCAGCTTACCTTAACTTGAACACCAAAGGAAATAACCTCTTGAATGGTTCCAACTTTGCCTCAGCTGCTTCTGGTTACTATGAACCCACAGCCAAACTATATAATGCAATTCCATTGAGTCAGCAACTAGAATACTACAAGGAATGCCAGAAAAAATTGGTGGACGCAGCAGGAAAATCAAATGCTTCATCAATTATATCTGATGCTATATATCTTGTCAGTGCTGGAACCAGTGATTTCATTCAGAACTACTACATAAATCCTTTGCTTAACAAGTTTTATACAGTTGATGAATTCTCAGACACCCTCTTGCACTCCTATTCAGACTTCATCAAGGCATGCATTTCTCAACCTTACCATTGA 639 0.385 MKSMRFSWSFLISFLLALLLNVSYGQPLVPALFIFGDSVVDVGNNNHKFTLIKADFLPYGRDFENHYPTGRFCNGKLAIDFTAEVLGFTSHPPAYLNLNTKGNNLLNGSNFASAASGYYEPTAKLYNAIPLSQQLEYYKECQKKLVDAAGKSNASSIISDAIYLVSAGTSDFIQNYYINPLLNKFYTVDEFSDTLLHSYSDFIKACISQPYH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01813 212 Gene3D SGNH hydrolase 24 210 IPR036514 -
Vimu5g01813 212 Pfam GDSL-like Lipase/Acylhydrolase 32 182 IPR001087 GO:0016788
Vimu5g01813 212 PANTHER GDSL ESTERASE/LIPASE EXL3 16 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01813 Vimu-Chr5 30009238 30010286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01813 27 179 Acyl Lipid Metabolism Gene Families AT4G10950 38.312 1.64e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01813 - - gmx:100775618 318.546