Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01804 ATGTTGGAGCAAGCATTTGGAGATCCAAAAAGCCCTGAGTTCTCGAAACGCAATGTAATACCAAGAGTGATTTATCGATCATTGGCTATTACTATTTCAACCATTATAGCAGCCATGCTTCCATTTTTTGGGGACATAAACTCTCTTATTGGAGCTTTTGGCTTTATTCCTCTTGATTTCATCTTGCCAGTCATTTTCTACAATTTCACATTTAGGCCATCTAAGAGAAGCTTTATTTTCTGGTTGAATCTAACTATTGCCGTCACTTTCTCTGCATTGGGAGCTATAGCAGCAATTGCAGCAGTTAGACAGATTGTTCTTGATGCAAAAAGTTACCGATTATTTGCTAATGTATGA 357 0.3754 MLEQAFGDPKSPEFSKRNVIPRVIYRSLAITISTIIAAMLPFFGDINSLIGAFGFIPLDFILPVIFYNFTFRPSKRSFIFWLNLTIAVTFSALGAIAAIAAVRQIVLDAKSYRLFANV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01804 118 Pfam Transmembrane amino acid transporter protein 18 103 IPR013057 -
Vimu5g01804 118 PANTHER OS05G0424000 PROTEIN-RELATED 17 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01804 Vimu-Chr5 29898444 29898800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01804 1 118 Organic Solute Cotransporters AT1G08230 66.949 1.02e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01804 - - pvu:PHAVU_011G089500g 194.897