Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01802 ATGTGGAACGTGATGGAATTTTCAGGTGGTGGGCGCGCGAGGGAAAGGTTAGAAGAAAGGGATGTATCTCGCAATTCTTCATTCTCTCTTCTTCGCATATCTGCTAAAGAGAACATCAGAGGCCTTCAGTCAGAAGAAATGGGAACTCTGTTTCCTGATGAAAAATCTGAGAACCCAAATGGTGTTCATCAACTTCACCAGCAACATGAAGATGTTGATGCAGGAGCTCTTTTTGTCCTCAAATCCAAAGGTTCTTGGTTGCATTGTGGATACCATTTGAGCACATCGATAGTGGCACCAACTCTTCTAAGTCTTCCTTATGCATTCACCTTCCTTGGATGGACGGCTGGGATCTCATGCTTGGTGATTGGAGCATTGGTGACTTTCTATTCATATAATTTAATATCTAGGGTTCTTGAACACCACGCCCAAAATGGTAAACGTCAACTACGCTTTAGAGACATGGCTCGTGATATTTTAGACGAAGATATGTGGGTCGCTCTTGGGTTAATATGCAGGAAATTCGCACGATTGGAGTTGCATGAGGTGGAAGAAAACATTTGCAAAGGTGGAAGAAAACATTTGCAATCTGTAGTTGCGGCAACATTTAGGGTGTTATGGTGCGACGACGACGACAGAGTGGTTCTTGTGGTGCGGCCTGGTGCTAGTAGTGGCGGAGGCGGCTTGTTAAGGACTAGTGGTGAGGATGGTGGTGATGCTAGGGTTTAG 729 0.4513 MWNVMEFSGGGRARERLEERDVSRNSSFSLLRISAKENIRGLQSEEMGTLFPDEKSENPNGVHQLHQQHEDVDAGALFVLKSKGSWLHCGYHLSTSIVAPTLLSLPYAFTFLGWTAGISCLVIGALVTFYSYNLISRVLEHHAQNGKRQLRFRDMARDILDEDMWVALGLICRKFARLELHEVEENICKGGRKHLQSVVAATFRVLWCDDDDRVVLVVRPGASSGGGGLLRTSGEDGGDARV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01802 242 PANTHER OS05G0424000 PROTEIN-RELATED 73 168 - -
Vimu5g01802 242 Pfam Transmembrane amino acid transporter protein 83 168 IPR013057 -
Vimu5g01802 242 MobiDBLite consensus disorder prediction 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01802 Vimu-Chr5 29887312 29892944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01802 53 164 Organic Solute Cotransporters AT5G41800 50.893 8.48e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01802 - - vum:124835403 218.779