Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01773 ATGGGAAGCACCTCCTTCTGCTTGCTCCACTCGTCCCTCTGCAAATTCCCATCTTCATCTGGGTACAGACCAAAGACCAAGTTGCGAGCTCCTACATCCTCCTGCTTGGGCCAGCAAGACCCAGTCTGCAGCAAAAGAACCATTCTTTTAACGAGCATAGCCCTTCTTCCATTTGGCCGTTTGAAGAGGGTCCCGGCTCTCGAACCACCAGCCGCAATTCCAGCTGAAGAAAATGAGGTGAAGACAAAAGAGGATAACCAGGAAGCTGAGACAGCACCTGAAGTGGAAACACCATCAAATTCCTTTCTGTCTCTCCTGAATGGAATTGGAATATTTTCTTCTGGTGTGCTGGGTGCTCTCTATACACTTTCTCAGAAAGAAAAGGCTGCTGCTGATGTAACAATGGAAACAATGAGCTGTAAACTGAAGAAAAAGGAAGAACTGATTGTTTCCTTAAAGAAGGACTATGAGCTGAAGTTACTGAATAAGCAGGAGGAACAAGCCAACCTACTTGAAAAGGCAAAGGAAGAGAAGCAAGCATTGATAGAACAACTAAATTCTGCAAACAGTACTGTCAACCACTTGGGGAAGGAGCTTAAAAATGAGAGAATTTTGGTTGAGGATCTGAAACTTCAAATTGACAGATTTGAGACTGAGCTTTCAAAGATTGATACAGATAAGAAAGATCGTGAAAGCAATTTGAAAGAAAAGATAGATTTCATTGGAGTTTTACAGGAAAGAATCAATCTTCTCAGTGAGGACCTCAAGGACAAAGAAGATGTTGTTAAGAATCTCAATTCATCTCTAGCAGTAAAGGAGTTGGAATTGAAGAGATTGAATTCTACCTATGAGAAAACCAAGGATGACTTATTCAGTGTACAATTGCAGATTCAAGGGTTGAAAGATGAACTACTTAAAAGCCAACAGGAACTAGAAGCTAAAGATTCCTTGGTGATGGAACTAAATTCAAGATTGAGCTCCTTAAGTCACGAGAATGATGATTTTAGGAGTAAATATGATGTCATGGAGAAGGAATACAATGACCTAAAGCTCACTACTGAAAGAAAGGCTGCTTTGGATTCTAGGGTTTTAAGTGAAAAAGAAGAGGAGCTTCTTCAGCTAAAGCATCAATTTGAACTTGCCCTGCGTGAATCAAGCAAAAACCTGGTCATCAATGGTGATTTATCCCGGGAAAGAGATTTGTTGAAGGAGGCTCTTGAGAATCAATCTGGTAAAGTGAATCATTTGAAGCATGAACTTCAAGACACCCAGGGAAATCTTGAAAAATCACGAAAAGAGTCTGCTGAATTGGAAAACCTTTTAAGTGAGTCAAACAAACTGCGCAATGAGCTTGAGGTTGAGGTGTCTAAGCTTTCATCTGAGCTCACTGAAGTTAAAGGATCACTACAGAGAAGTCTTGATAATGCAAAACATGAGGCAGAGATGCTAGCAAGTGAGGTTACAACTGCAAAGGAACATTTGAAGAAAACCGAAGCAGAGCTACAAGGTAAGTCCCATGATTTAACAATTGCTCTTGAAAAGTGTGATAGCCTACAAAAAGAATTAATTGAGATATACAAAAAGGCTGAGACCACAGCAGAGAATTTAAAGGAAGAAAAACAGTTAGTTGATTCTTTGAAAAGAGATATACAAGCTTTAGAGAAGCAAATCTCAGAAGACAAGGAGTCCCGAAAGTCTCTTGAGACGAACTTGAAGGAGGCTGTCAAATCACTTGATGAAATGAACCGAAATGCAACGATCCTCTCTAGTGAACTACAGAGAACCAACTCTCTTGTTTCTAGCCTTGAAAAAGAGAAAGAGGTGCTTATGAATTCCCTAGCAGACCAAAGAAATGCAAGCAAAGAGGCCAAGGAACACATTGAAGATGCTCATAACCTCATCATGAAACTCGGCAATGAAAGAGAGAATTTAGAGAGAAAAGGGAAGAAATTGGAGGAGGATTTGGCTTCTGCCAAGGGTGAGATATTGCGCTTAAAGAGTCGAATCAGTTCTTCTAAAGTTGCTGTTAACAATGAGAAAGTGCAGAAAGATGGAAGTGAAAGCAAGGTGAATTCTTCAAAAGTTACTGTTGACAACGAGCAAGTGCAGAAAAATGGAGGTGAAAGCAAGGTTACTGTAACTGCGAGAAGAAGAAAAGCTAATCCACAATAA 2172 0.4019 MGSTSFCLLHSSLCKFPSSSGYRPKTKLRAPTSSCLGQQDPVCSKRTILLTSIALLPFGRLKRVPALEPPAAIPAEENEVKTKEDNQEAETAPEVETPSNSFLSLLNGIGIFSSGVLGALYTLSQKEKAAADVTMETMSCKLKKKEELIVSLKKDYELKLLNKQEEQANLLEKAKEEKQALIEQLNSANSTVNHLGKELKNERILVEDLKLQIDRFETELSKIDTDKKDRESNLKEKIDFIGVLQERINLLSEDLKDKEDVVKNLNSSLAVKELELKRLNSTYEKTKDDLFSVQLQIQGLKDELLKSQQELEAKDSLVMELNSRLSSLSHENDDFRSKYDVMEKEYNDLKLTTERKAALDSRVLSEKEEELLQLKHQFELALRESSKNLVINGDLSRERDLLKEALENQSGKVNHLKHELQDTQGNLEKSRKESAELENLLSESNKLRNELEVEVSKLSSELTEVKGSLQRSLDNAKHEAEMLASEVTTAKEHLKKTEAELQGKSHDLTIALEKCDSLQKELIEIYKKAETTAENLKEEKQLVDSLKRDIQALEKQISEDKESRKSLETNLKEAVKSLDEMNRNATILSSELQRTNSLVSSLEKEKEVLMNSLADQRNASKEAKEHIEDAHNLIMKLGNERENLERKGKKLEEDLASAKGEILRLKSRISSSKVAVNNEKVQKDGSESKVNSSKVTVDNEQVQKNGGESKVTVTARRRKANPQ 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01773 723 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 93 676 - -
Vimu5g01773 723 Coils Coil 399 500 - -
Vimu5g01773 723 Coils Coil 325 352 - -
Vimu5g01773 723 Coils Coil 135 191 - -
Vimu5g01773 723 Coils Coil 248 289 - -
Vimu5g01773 723 MobiDBLite consensus disorder prediction 688 723 - -
Vimu5g01773 723 SUPERFAMILY Tropomyosin 450 684 - -
Vimu5g01773 723 Gene3D - 435 618 - -
Vimu5g01773 723 MobiDBLite consensus disorder prediction 69 97 - -
Vimu5g01773 723 MobiDBLite consensus disorder prediction 673 723 - -
Vimu5g01773 723 Coils Coil 627 668 - -
Vimu5g01773 723 Coils Coil 199 226 - -
Vimu5g01773 723 Coils Coil 519 619 - -
Vimu5g01773 723 Coils Coil 297 317 - -
Vimu5g01773 723 Coils Coil 364 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01773 Vimu-Chr5 29475048 29478691 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01773 - - gmx:100791634 968.378