Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01704 ATGCCATGCCCTTATCCCGAATCCTCATGTGAATCTCGCACACCCGGGATTATCGGGTACCTCAAACTCCTTCACACAATTCTCATCACCATGCCCTCGTGTCATAACACCAACAACAACCTCAACCTCAAAGAAGGTCTCACACAGAACCACAGCAAGACTAGGAAACGAGGTTGCTCCTCCTCCTCTTCCTCATCTCTTGTCAGAAGATACCGTTTCAAGAGGGCCATTTTGGTTGGGAAGAAAGGAGGGTCCAGCACCCCAGTTCCCATGTGGAAGACCAAAACAACTTCTCCTTCTCTTCCTACACACCACACCAAGCCTTTGCATTCTTCTGCCTCCATGTTACCTTCCTCCAAGGACAGGGAGCTTTCTGTGTCAGCCAGGAAACTCGCTGCTACACTCTGGGAAATCAATGATTTGCCTCCTTCCCGGGTCAAGAAGGAGTTCGAGGTTGATCAAATGAGAGGCTGCAAGGAGAAGGGTAGAGGCAGAGAGAAAAGTTCGGGGTTGTCCAGATCGGGATTTTTGCGGTCGCAGATGTCAGATCCATCTCATAGTCCTGCCTCTGAGAGGATGAAGGGTCTTGAAGGGGATAGCTGCAAAAGAAGAGTGTCGGGGTTTTCTCATCAGCTTCTGTCGGGTGATTACTATTTGGATGCTCTGGATGCTCACAGCAATGCTAATTTAATTGAGGAGGTGGAAAATCAGTTAAAAAGCGAGAAGAATCGTGGCAAACGCACTGGTGGTGTTAAGAACCGTCTGAAGGAAGCTAGAAGTGGATTATCTACATCGAAGAAGCTTCTGAAGGTGTTAAATCAAATGTGCCTTAGAGAGCAGCAAGCATCAAGCATGCCCCTTGTCTTGGCTCTGGGGAGTGAGCTTGATCGAGTGTGCCACCAAATTGATCAACTGATCCAAGAACAGCGTTCAAACCAGAACGATATGGAGTATGTCATGAAGCATTTTGGAGAAGAGAAGGCTGTTTGGAAAAGAAGAGAACGAGAAAGGGTTCATGATGCCATAAAACATGTGGCAGAGGAGCTTGCGGTGGAGAAGAAGTTGAGAAGGCAAACTGAACGGTTGAACAAGAAGATTGCCAAAGAGATGGCCAGTGTAAAAGCTTCCCATTTGAAAACATCCAAAGAGCTCGAAAGGGAGAAGCGTGCAAAGGAGATACTGGAGCAAATTTGTGATGAACTGGCTAGAGGTATCGGGGAAGATAGAGCACAGGTGGAGGAACTGAAAAGGGAATCAGCTAAAGTTCGCGAGGAGGTGGAGAAGGAAAGGGAAATGCTTCAGTTAGCTGATCTCTTACGCGAAGAGAGAGTCCAGATGAAGCTTTCAGAGGCTAAGTATCAGTTTGAGGAGAAGAATGCTTTCCTGGAAAAGCTGAGGAATGAGCTTGAGGACTATGTGAGGACCAAAGATGGACAAAATGAGGATGTTTCTCCAGAATGTAAAAATATCAAGGATCTTGAGTCTTATTTCAACAATGTATGTAGGGGATTCCAGAATGCAGAGAAAGAGGATGATTCAGATGTTGAAAACGACGATGTAGGACAAGGAAGAGATGATGACTCAGATGACAGTGATCTCCATTCAATTGAGTTGAACATGGATGATGCCAGCAAAGGCTACAAGTGGAGTTTTGCGAGTGAAAATGATGGTCAAGACAAGAGATTTTCAATTGAAAAAGAAAGTATAGGGAGAAAGTCTTTCTCTGAGAAAATTCAGTGGGGAAGTATTTGCTTCAACAAGGGAACTTCAAGTGGTAGGAAGAGGGATTTTTCCATAAATATTCAAGAAATTTCTGATCATTTTGATCCTGATAGGTCTGTTGAATTTCTCTCACAAGCTCGGATACAAGATGATAATGATGAAACTCAAAGCAAAAGGTCAATTAAGGGGCTCCAAGACTCTATCTCATGTGCTAATTCTGATAAGATAACTGGTAGACTATTAACTTTGCAGTGTGCTGGTGGAGAAGCTGGGGAAAAAGGTCTTGCCCTGGAGGATGACAATTTGAAGCAAGAAATTGCAGGAGAAAAGTCTTGA 2058 0.4466 MPCPYPESSCESRTPGIIGYLKLLHTILITMPSCHNTNNNLNLKEGLTQNHSKTRKRGCSSSSSSSLVRRYRFKRAILVGKKGGSSTPVPMWKTKTTSPSLPTHHTKPLHSSASMLPSSKDRELSVSARKLAATLWEINDLPPSRVKKEFEVDQMRGCKEKGRGREKSSGLSRSGFLRSQMSDPSHSPASERMKGLEGDSCKRRVSGFSHQLLSGDYYLDALDAHSNANLIEEVENQLKSEKNRGKRTGGVKNRLKEARSGLSTSKKLLKVLNQMCLREQQASSMPLVLALGSELDRVCHQIDQLIQEQRSNQNDMEYVMKHFGEEKAVWKRRERERVHDAIKHVAEELAVEKKLRRQTERLNKKIAKEMASVKASHLKTSKELEREKRAKEILEQICDELARGIGEDRAQVEELKRESAKVREEVEKEREMLQLADLLREERVQMKLSEAKYQFEEKNAFLEKLRNELEDYVRTKDGQNEDVSPECKNIKDLESYFNNVCRGFQNAEKEDDSDVENDDVGQGRDDDSDDSDLHSIELNMDDASKGYKWSFASENDGQDKRFSIEKESIGRKSFSEKIQWGSICFNKGTSSGRKRDFSINIQEISDHFDPDRSVEFLSQARIQDDNDETQSKRSIKGLQDSISCANSDKITGRLLTLQCAGGEAGEKGLALEDDNLKQEIAGEKS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01704 685 MobiDBLite consensus disorder prediction 507 534 - -
Vimu5g01704 685 PANTHER GB|AAF24581.1 64 643 IPR043424 -
Vimu5g01704 685 Coils Coil 398 432 - -
Vimu5g01704 685 Coils Coil 224 244 - -
Vimu5g01704 685 MobiDBLite consensus disorder prediction 172 187 - -
Vimu5g01704 685 MobiDBLite consensus disorder prediction 89 119 - -
Vimu5g01704 685 MobiDBLite consensus disorder prediction 157 198 - -
Vimu5g01704 685 Coils Coil 455 482 - -
Vimu5g01704 685 MobiDBLite consensus disorder prediction 511 526 - -
Vimu5g01704 685 MobiDBLite consensus disorder prediction 84 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01704 Vimu-Chr5 28741202 28744083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01704 - - var:108340557 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01704 5 28741202 28744083 Vimu5g01704 5 28741202 28744083 ECH