Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01640 ATGGCTATGAACCAATCAAAGGCTGTGTTGCTGAGAGTGAGTTTGGTGTTGGTGGCTCTCTGCATAGCAGGATACATAGTGGGTCCCCCTCTCTACTGGCATTTCGTTGAAGGTTTGGCTGCAGTGAGCCATTCTTCTCCTTCTGCTTGTGCCCCCTGCGTCTGTGATTGCTCTTCTCAACCTATTCTTTCCATTCCTCAAGATTGTGCAAAGTCTGATCCAGAAGTGAGTGGAGACACTGAAAAAAACTTTGCAGAGCTATTGACAGAGGAACTGAAGATGCGGGAGAACCAAGCCATGGAAAATCAGCAACATGCTGACATGGCACTACTTGAGGCAAAGAAGTTTGCATCACAGTATCAGAAGGAAGCTGACAAGTGCAATTCAGGGATGGAAACCTGCGAAGAGGCTAGGGAGAAGTCTGAGTTGGCATTAATGGAGCAGAAGAAGCTAACTGCATTGTGGGAACTTAGAGCTCGTCAGAAAGGGTGGAAAGAAGGGCTTGCCAAATCTCATGCACGCTCTCAAGGAAAAGTGCAGAGTTCTTAG 549 0.4736 MAMNQSKAVLLRVSLVLVALCIAGYIVGPPLYWHFVEGLAAVSHSSPSACAPCVCDCSSQPILSIPQDCAKSDPEVSGDTEKNFAELLTEELKMRENQAMENQQHADMALLEAKKFASQYQKEADKCNSGMETCEEAREKSELALMEQKKLTALWELRARQKGWKEGLAKSHARSQGKVQSS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01640 182 Pfam Protein of unknown function (DUF1068) 10 167 IPR010471 -
Vimu5g01640 182 PANTHER EXPRESSED PROTEIN 8 174 - -
Vimu5g01640 182 MobiDBLite consensus disorder prediction 163 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01640 Vimu-Chr5 27968871 27971008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01640 - - gmx:100527412 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01640 5 27968871 27971008 Vimu5g01640 5 27968871 27971008 ECH
Vimu4g00863 4 6924846 6926838 Vimu5g01640 5 27968871 27971008 PCT