Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01634 ATGTTGCGCGTAGCTCCCAAATTCTTCACCGCCGCTCCGCTTCGGACCGTTTCACTCTTTGCATGTCGCTTCTCACTCCGCTCTATCGCTGACTCAGCTCCTTTCAACAAAATCCGCATTCAAAGAGATGATGAGACTGCATTTGATGCATATGTTGTTGGCAAAAACAACGCTCCTGGAATTGTTGTGCTTCAGGAGTGGTGGGGTGTGGATTTCGAAATTAAAAACCATGCTGTGATGATTTCTCAACTTGGTCAGGGATTCAAAGCTCTTATTCCAGATCTATACAGAGGAAAGGTTGGTCTGGATGTTGCAGAAGCACAACATTTGATGAATGGTCTTGATTGGCAAGGCGCTCTGAAAGATATTCATGCTTCAGTTAACTGGCTTAAGGCAAATGGTTCAGCCAAGGCTGGTGTTACTGGATTTTGTATGGGGGGTGCACTTGCTATTGCAAGCTCAGTCTTGGTTCCAAATGTTGATGCTGCTGTAGCTTTCTATGGAGTTCCTTCCTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGCTCATTTTGGAGAGCTGGATAATTTTGTTGGTTTTTCAGATGTTACGGCAGCCAAGGCCTTGGAGGAGAAGCTGAAGGCGGCTGGAGTTGCTCATGAGGTACACATATATCCTAACAATGGACATGCATTCATGAACAGGTCTCCTGAAGGAATCAAGAGGAGGAAGAGCATGGGAATGCCAGACGAAGATGAAGCTGCAGTTCAGCTCGCATGGTCTCGTTTCCAGTCATGGATGACACATTACTTAACTGGCTAA 813 0.4674 MLRVAPKFFTAAPLRTVSLFACRFSLRSIADSAPFNKIRIQRDDETAFDAYVVGKNNAPGIVVLQEWWGVDFEIKNHAVMISQLGQGFKALIPDLYRGKVGLDVAEAQHLMNGLDWQGALKDIHASVNWLKANGSAKAGVTGFCMGGALAIASSVLVPNVDAAVAFYGVPSSELADPAQAKAPVQAHFGELDNFVGFSDVTAAKALEEKLKAAGVAHEVHIYPNNGHAFMNRSPEGIKRRKSMGMPDEDEAAVQLAWSRFQSWMTHYLTG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01634 270 Pfam Dienelactone hydrolase family 48 267 IPR002925 GO:0016787
Vimu5g01634 270 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 39 268 - -
Vimu5g01634 270 SUPERFAMILY alpha/beta-Hydrolases 38 268 IPR029058 -
Vimu5g01634 270 Gene3D alpha/beta hydrolase 30 268 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01634 Vimu-Chr5 27922998 27927156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01634 K01061 - gmx:100799250 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01634 5 27922998 27927156 Vimu5g01634 5 27922998 27927156 ECH
Vimu4g00871 4 7016409 7019265 Vimu5g01634 5 27922998 27927156 PCT