Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01630 ATGGATGAGAACGAGAAACAACATCCAGAACACCATGTAGAGTTACCGATAGATGTTTCAATCACCAAAACTCAGTCAAATTGCATCCAAATCAAATATTTATCCTCTGTTATGACACAATTCCATGCAGGGTACTTCAGGATTAGTTTGTCTCTCACAAGCCAAGCTTTTCTCTTGAAGATCTTGATAGAGCCAATCCAAGATGCACATGCTCTGAGACGTTTATTTTCATCCATACCCTCTTCTGTCCACACTCTCCTATGGTTCCTGGCTTTGTTCATTCTGGCCACACTCTCTTTTCTTTACATTCTAAAATGTGTTCTACAGTTTGACATGGTTAAGGATGAATTCTTAAACCATGTGGGGGTGAATTATCTATTTGTCCCCTGGATTTGTTGGCTAATTTTGCTAGAATCATCACCATTCCTCTCTCCAAGAACACTTTTTTTCAAAATACTTTGGTGGGTGTTCGTTGTGCCAATGGTGATGCTTGATGTGAAGATTTATGGGCAGTGGTTTACAAAAGGGAAGAGGTTTTTGTCAGTTGGAGCAAACCCAACAAGTCAGCTGTCTGTGATTGGGAACTTGGTGGGGGCACAGGCTGCTGCACAAATGGGTTGGAAGGAGAGTGCACTATGCATGTTTTCTTTGGGTATTGTTCATTACTTGGTGCTTTTTGTCACACTGTATCAGAGATTAGCAGGGAACAATAATATCCCTTCAATGCTGCGTCCAGTTTTCTTCTTGTTCTTTGCAGCACCCAGCATGGCCAGCTTGGCTTGGAACTCCATTTGTGGCAAGTTTGACACCACATGCAAGATGCTCTTCTTCCTCTCCTTCTTCCTCTTCTTGTCCCTGGTTTCAAGGCCTTTGCTATTTAAGAAGTCGATGAAGAAGTTCAATGTGACATGGTGGGCTTATTCTTTTCCTCTTACGGCTTTGGCACTTGCTTCAGTAGAATATGCTCATGAAGTTAAGGGAATCATGGCTCACACCATCATGTTTCTCTTATCATCTGTCTCTGTTTTGGTCTCTCTCATATTACTGCTTATCACTGCTATCAACATCACCAAACACGCTTTTACCTCTTTCCAACCTTAG 1101 0.4187 MDENEKQHPEHHVELPIDVSITKTQSNCIQIKYLSSVMTQFHAGYFRISLSLTSQAFLLKILIEPIQDAHALRRLFSSIPSSVHTLLWFLALFILATLSFLYILKCVLQFDMVKDEFLNHVGVNYLFVPWICWLILLESSPFLSPRTLFFKILWWVFVVPMVMLDVKIYGQWFTKGKRFLSVGANPTSQLSVIGNLVGAQAAAQMGWKESALCMFSLGIVHYLVLFVTLYQRLAGNNNIPSMLRPVFFLFFAAPSMASLAWNSICGKFDTTCKMLFFLSFFLFLSLVSRPLLFKKSMKKFNVTWWAYSFPLTALALASVEYAHEVKGIMAHTIMFLLSSVSVLVSLILLLITAINITKHAFTSFQP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01630 366 CDD TDT_SLAC1_like 41 334 - -
Vimu5g01630 366 Pfam Voltage-dependent anion channel 40 352 IPR004695 GO:0016020|GO:0055085
Vimu5g01630 366 PANTHER S-TYPE ANION CHANNEL SLAH3 26 355 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vimu5g01630 366 Gene3D - 34 362 IPR038665 -
Vimu5g01630 366 FunFam S-type anion channel SLAH1 35 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01630 Vimu-Chr5 27849998 27851502 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01630 K26672 - gmx:100794114 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01630 5 27849998 27851502 Vimu5g01630 5 27849998 27851502 ECH