Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01603 ATGCTAATGGGAGTCAATACTGTGATGGCTAGAAGTTTTGAGAGAAGTATGGAAGCTGGCACGTTTGGAATGATTGGTGATAAACGTTGCATGAGTAACGTCCCAAGTAAAACCAGTGAGACAAACCCATCTGGTTTCCGTCCATTATCTCCTCATCTCCCTCTTTATCAGCCTCAACTCTCTTCAACTCTCTCAATTTTTAATAGAATTGCTGGAGCTTTCTTAGCCGCTGTCATTTTACTTTTTTATATGATATATATAAAAGTGGGTTCGGTTAGCCTCACCTATGACTCTTTCTACCAGTTCATATTTTATTCATCAAAACTACACCTACTTGTCATGGAGATTTCTGCCTTAGCCGTGACCTACCATCTGTATAGTGCAATTCGTCATTTACGCATATGA 405 0.3951 MLMGVNTVMARSFERSMEAGTFGMIGDKRCMSNVPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKVGSVSLTYDSFYQFIFYSSKLHLLVMEISALAVTYHLYSAIRHLRI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01603 134 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 32 133 - -
Vimu5g01603 134 CDD SQR_TypeC_SdhC 47 132 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Vimu5g01603 134 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 30 133 IPR034804 GO:0016020
Vimu5g01603 134 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 39 132 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Vimu5g01603 134 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 40 132 IPR034804 GO:0016020
Vimu5g01603 134 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 47 132 IPR000701 GO:0016627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01603 K00236 K03885 gmx:100527396 234.572