Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01597 ATGACCAAGGATTCCTTTTTGCTTCCAGGCCTTTGTTCATTGAATTTCTCTGCTGCTCAAGATATAATGACCACAACTGCTACTGATTGCTGGACATCCTTTGCTCCATATTTGGCAAATGTTGTATGTTGTCCTCAATTTGATGCCATGTTGGTGACCCTCATAGGGCAGTCGAGCAAATACTCTGGGGTACTAGCTTTGAACGCAACTCATGCTAATCACTGCCTCTCTGATGTTCAGAAGGTCCTTGTCAGTCAAGGAGCAAATGAGAACCTAAAAGAAATATGTTCAGTCCACCCAAGAAATCTCACTGAGGCCTCTTGTCCTGTTGTATCTGTGGATGAATTTGAGAGTGTTGTAGATACTTCGAGACTGCTGACTGCTTGTAGAAAAATTGATCCTGTAAATGAGTGTTGTGATCAAGTTTGCCAAAATGTCATACACTATGCTGCTAGAAAAATTGCCTTAAATGATTTGTCTACTTCAGATGGAAACCATAGCATGCCTGGACCGAAAGCTAGGATCAATGATTGCAAGAATATTGTTGTACGTTGGTTGGCTAGTAAACTTGATCCATCCACTGCAAATAGTGTTTTTAGAGGACTTTCAAATTGCAACCTAAACAAAGTATGCCCATTGGTTTTTCCAAATGTCTCAAGTGTTGTGAAAGAATGTGGCCATCTCATACATAACCAAACATCTTGCTGCAAAGCCATCAAAAGTTATGTGTCCTATTTGCAAGAACAGAGCTTTGTAACCAATCTACAGGCCTTGAAATGTGCTGCATCACTTGGAAAGAAATTGCAGAATGCAAACGTCTCCAAGGATGTTTATAGTCTATGTCATATAAGCCTGAAGGACTTTTCTCTTCAAGAATCTGGCTGCCTTTTGCCGAGTTTGCCTTCAAATGCAGTATTTGATGGAACTTCGGGGATTGGATTCATTTGTGACCTTAATGACAACATTGGAAATCAAAGTGGAGAACCTGAGATGGAACAAGTTGATCAAGTATACCCTTGTAGACAAAGCTCTAACCTAGAACTGAGAAGGGAGACGGCAATGGTTTCAAACTCTGGTACAAGCTTCATGAGTGCTTCAAGAGAGGTTTCGAATTCTGGTAGAAGCTTCATGAGTGCTTCATGA 1143 0.4077 MTKDSFLLPGLCSLNFSAAQDIMTTTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSKYSGVLALNATHANHCLSDVQKVLVSQGANENLKEICSVHPRNLTEASCPVVSVDEFESVVDTSRLLTACRKIDPVNECCDQVCQNVIHYAARKIALNDLSTSDGNHSMPGPKARINDCKNIVVRWLASKLDPSTANSVFRGLSNCNLNKVCPLVFPNVSSVVKECGHLIHNQTSCCKAIKSYVSYLQEQSFVTNLQALKCAASLGKKLQNANVSKDVYSLCHISLKDFSLQESGCLLPSLPSNAVFDGTSGIGFICDLNDNIGNQSGEPEMEQVDQVYPCRQSSNLELRRETAMVSNSGTSFMSASREVSNSGRSFMSAS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01597 380 Pfam SPARK 10 164 IPR043891 -
Vimu5g01597 380 PANTHER GPI-ANCHORED PROTEIN 8 349 IPR040336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01597 Vimu-Chr5 27484099 27488205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01597 - - vra:106756607 620.542