Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01590 ATGGGTGTTGTGTTGAAGCTAGTAGACGCCATTCTGTTCCTGTTCTTCCTCGTCATAGCAGTGGCTGCTCCTCTCATTGATGCTCAAGCGTGTCTTCCTCTGAGTTATTTCCCTGAAATTCTTGTCCAACTCAAGGAACACTACACCCACGACTATGGTGATTACCTTGTGGCTGAAAAGCCACACTTTTTTGTAGGTCTTGTTTGGCTTGAGCTTCTATTCCAATGGCCTCTTGCACTTCTCAACATCTATGCCATTCTCACTTCCAAGCCTTGGTTCAACACCACTTGCTTGATGTATGGTGTCTCTACCTCTACCTCCATGGACACTTATTTCACTGAAGATGGAGGTGTAATATTAGTCTTTGATCCAGCCATAGATGTGAGTAACAATGAGACATTGGTTGTTTGTGGGTTGCAGGTTGCTATATTATCAGAAATGATGAATTCGAATAGGGCATCTGATAAGCTATTAACACTGTATGCCTCTTTCATGGGTTTGGGTGCTCTGGCTCTGCTGCGGGGTTTGCTCACATGTTCATCCAAATCAACTTCAGCTCTAGGCAAAAGACCTGCATTGATGAGGAAAAAGCGAGCTTGA 600 0.4417 MGVVLKLVDAILFLFFLVIAVAAPLIDAQACLPLSYFPEILVQLKEHYTHDYGDYLVAEKPHFFVGLVWLELLFQWPLALLNIYAILTSKPWFNTTCLMYGVSTSTSMDTYFTEDGGVILVFDPAIDVSNNETLVVCGLQVAILSEMMNSNRASDKLLTLYASFMGLGALALLRGLLTCSSKSTSALGKRPALMRKKRA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01590 199 Pfam EXPERA (EXPanded EBP superfamily) 41 110 - -
Vimu5g01590 199 PIRSF TMP_97 1 190 IPR016964 -
Vimu5g01590 199 ProSiteProfiles EXPERA domain profile. 8 142 IPR033118 -
Vimu5g01590 199 PANTHER SIGMA INTRACELLULAR RECEPTOR 2 1 196 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01590 K26171 - gmx:100790628 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01590 5 27415543 27417187 Vimu5g01590 5 27415543 27417187 ECH