Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01585 ATGGATCATTCTCTGAATTGTTCATCAAGGGGCATAGTTGGTGGAAGCAAAAAACCAATCGGTTCTGATGGAGAAAGTGGATGGACATCTTACTTTGAAGATTTCTCAAAAGGCACAGAACCCAGTTATTGTTCCAGTTTGGATGGTTCATCTTTGCTCTCAGATGCTGCTTCTTCTGCTGCATGGAAATTTTCTCACCACAATCATCATCTTCTTTCTTCTCCCTCTTTCAAGGGTATCAACACCACTGCTCCAAATCCACCTAAAAAGTTGACCTTCAAGAAAGCAAGAGCCAAACAGATATCAGAAGATGACCCTTTGGAAGACACTGCTAGCTCTCCTGTCAATAGTCCAAAGGTGAGAGACTTGAATCCAGCTGAAATGAGCTCTAGAAAAGATGATGATGATGAACTGGGTAAGGAGTTGAAATCATCAGAGCATTATTCAGATTTGAAGAGAGATGATAAATTAAAGTATAATGGAAAGAATGGTGATTGCACAGAGTTGAAGAAAAGGGGATTATGCTTGGTTCCTTTGTCTTTGTTGGTTAATTATTTGGGGTGA 564 0.3989 MDHSLNCSSRGIVGGSKKPIGSDGESGWTSYFEDFSKGTEPSYCSSLDGSSLLSDAASSAAWKFSHHNHHLLSSPSFKGINTTAPNPPKKLTFKKARAKQISEDDPLEDTASSPVNSPKVRDLNPAEMSSRKDDDDELGKELKSSEHYSDLKRDDKLKYNGKNGDCTELKKRGLCLVPLSLLVNYLG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01585 187 MobiDBLite consensus disorder prediction 1 26 - -
Vimu5g01585 187 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 187 IPR039280 GO:0010089
Vimu5g01585 187 MobiDBLite consensus disorder prediction 74 164 - -
Vimu5g01585 187 MobiDBLite consensus disorder prediction 125 164 - -
Vimu5g01585 187 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01585 Vimu-Chr5 27335925 27336785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01585 - - gmx:100804712 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01585 5 27335925 27336785 Vimu5g01585 5 27335925 27336785 ECH
Vimu4g00904 4 7454094 7455082 Vimu5g01585 5 27335925 27336785 PCT