Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01582 ATGGCTTCATCATTCTTTATGCCTTCATCAAAAATGCTGATGCAAATTATACATGAACAGATAGTGGAAGAAGAAGCCAGGTTTGAAGCCGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAAGCTAACCAAAAGGCCATACTCAGCTAGAGATGTGGTGTCCCTGAGAGGCAACCTCAGACAAAGCTATGGATCGGGTGAGATGGCCAAAAAGCTATGGCGCATTCTGAAGAACCACCAAGCCAATGGCACAACTTCAAGGACTTTTGGTGCACTTGACCCTGTTCAGGTCACTCAGATGGCGAAGCACTTGGACACCATCTATGTCTCAGGATGGCAGTGTTCGGCCACTCACACCACCACCAATGAGCCGGGCCCTGACCTTGCCGATTACCCTTATGACACTGTCCCCAACAAGGTTGAGCATCTCTTCTTCGCTCAGCAATACCATGACAGGAAACAAAAAGAGGAGAGAATGAACATGAGCAGGGAAGAGAGGGCAAGGACCCCTTATGTTGATTACTTGAGACCAATCATAGCTGATGGTGACACAGGTTTTGGTGGCACCACAGCAACTGTGAAGCTTTGCAAGCTCTTTGTGGAGAGAGGTGCTGCTGGCATCCACATTGAGGACCAGTCTTCTGTGACAAAAAAGTGTGGCCACATGGCAGGGAAAGTTCTGGTTGCCATCAGTGAACACATCAATAGGCTAGTGGCAGCAAGGCTTCAGTTTGATGTTATGGGGGTGGAAACTGTGCTGGTCGCCAGAACAGATGCAGAAGCTGCTAATTTGATTCAATCTAACATTGACACTAGGGACCATCAATTTATCTTGGGTGTGACCAACCCAAAGCTGAGGGGAAAGAGCTTGGCAGCTCTTATGGCAGAAGACATGGCTGCTGGGAAAAGTGGAGCTGAGCTTCAGGCTTTGGAGGATGAGTGGCTGTCAAAGGCACAGTTGAAGACTCTGTCAGAAGCAGTTGTGGAAGCAATAGAGAGACAGAACATTGGAGAGGAAGAGAAGAGAAGGAAGTTGAATGAGTGGAAGCAGCATTCAAGGTATGAAAGGTGCCTTTCCAATGAAGAAGGTAGGGAGATAGCAGAGAGGTTAGGAGTGAGGAAGCTGTTTTGGGACTGGGATTTGCCAAGAACTAGAGAAGGATTTTACAGGTTCAAAGGGTCTGTAACAGCATCAGTTGTGAGAGGTTGGGCTTTTGCTCCACATGCTGATGTGATATGGATGGAAACTGCAAGCCCCAATGTGGGTGAGTGCATAGAGTTTTCTGAGGGGGTTAGATCAAAGCACCCTGAGATAATGCTTGGGTACAATCTCTCTCCATCTTTCAATTGGGATGCTTCTGGCATGAGTGATGAGCAAATGAGAGACTTCATTCCCAAGATTGCAAAGTTGGGGTATGTGTGGCAGTTCATCACAGTTGGGGGTCTGCATTCTAATGCACTCATCACTTCAACATTTTCAAGAGACTTTGCCAACAGGGGCATGCTGGCTTATGTTGAGAGGATTCAGAGAGAGGAGAGGAACAATGGAGTTGACACACTTGCTCACCAGAAATGGGCTGGTGCTAACTACTATGACAGATACCTCAAGACTGTCCAAGGAGGAGTAACTGAAGAGCAGTTTAAAGAGTCATGGACTAGGCCAGGAGCTGTTGACATTGATGGAGGCACTACTGTGGTTGCTAAGGCCAGAATGTGA 1728 0.4763 MASSFFMPSSKMLMQIIHEQIVEEEARFEAEVAEVQAWWNSERFKLTKRPYSARDVVSLRGNLRQSYGSGEMAKKLWRILKNHQANGTTSRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQKEERMNMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPKLRGKSLAALMAEDMAAGKSGAELQALEDEWLSKAQLKTLSEAVVEAIERQNIGEEEKRRKLNEWKQHSRYERCLSNEEGREIAERLGVRKLFWDWDLPRTREGFYRFKGSVTASVVRGWAFAPHADVIWMETASPNVGECIEFSEGVRSKHPEIMLGYNLSPSFNWDASGMSDEQMRDFIPKIAKLGYVWQFITVGGLHSNALITSTFSRDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVTEEQFKESWTRPGAVDIDGGTTVVAKARM 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01582 575 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 22 548 IPR006254 GO:0004451|GO:0019752
Vimu5g01582 575 Pfam Isocitrate lyase family 31 547 IPR006254 GO:0004451|GO:0019752
Vimu5g01582 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 21 545 IPR015813 GO:0003824
Vimu5g01582 575 Gene3D - 27 545 IPR040442 -
Vimu5g01582 575 FunFam Isocitrate lyase 272 387 - -
Vimu5g01582 575 CDD ICL_PEPM 76 267 IPR039556 GO:0003824
Vimu5g01582 575 Gene3D - 272 387 - -
Vimu5g01582 575 NCBIfam isocitrate lyase 32 547 IPR006254 GO:0004451|GO:0019752
Vimu5g01582 575 ProSitePatterns Isocitrate lyase signature. 221 226 IPR018523 GO:0003824
Vimu5g01582 575 PIRSF ICL 378 556 IPR006254 GO:0004451|GO:0019752
Vimu5g01582 575 PIRSF ICL 22 290 IPR006254 GO:0004451|GO:0019752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01582 K01637 - gmx:100782793 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01582 5 27282657 27284786 Vimu5g01582 5 27282657 27284786 ECH