Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01571 ATGGTGCTGCGTCTGTTTTCCACCTCTGCTGATCAAGTTTCACGTGTTACTCATCACGTTCCACTTGTCCTTGTGGTTCACTCCCATCATTCACGTGTTACAGCTCCATACCTTTCCTCGCAACATCAAATTCTCTACGTCATGTTTCAACGGCTTATCGGTCACCTCGTCATTCGCACTCGCACTCTCAATCAGCTCGCCCGAGTCACGTCCTTCATTCATCGCCATAAATCTCTCCTCGCAGCACCATTTTCTTGTTCCCAAACTCTATCTTCCCTCCAATTCTCTACCGACACCTCCGCCTTCACCCACCACCCGGTCAGGCTCCCGGAAGATCTATCCAAAAACCTGATTGTCCTCTCGTGCGAGTCTTCAGCCGAAGGCGGCGTCTGCCACGTTTACTTGGTCGGAGTCTCTCATGGCTCCAAGGTATTGATTCTGGTCGTTCAGAATCAGGAATCATACAGACGAGTTCAGGCTACAGTGAAATTTCTGAAACCGGAGGCTGTCTTCCTAGAGTTGTGCCAGAGTCGTGCTTCAATTCTTACCCGTAAAAATTATAAGACAGCAGATGATCCTCATGAAGATGAGTTTCGTGTGGCATATGAAGAAGCCATCAAATATGGAGGCAAAGTGATATTTGGTGATCGCCCTGATAAGGTCTTTCCTGGCTCTGAGTTTCGTGTGGCATATGAAGATGCCACCAAGTATGGTGGCAGAGTGATACTTGGTGATCGCCCTGTACAGGTGGGATTAGTTTTTCAATTTAATATGTTTAAAGCAGAGAAAATTTATACTCTGTTGATGTTAAATTATCCTCTGAATAATAGAGTCATGTTTTTTACACTTATGTCTAGAAGTTCAATTGATAGAATTGCAAATTACATTAAGGAGATTTTGGACTCTTGTCTAAATCTCACTTGGGTTTGCCTTCTTCAGCAGAAGGAAACGGATGACAGTGGCATGAATATGTGGTGTCCGACTTTCATGGAGGTTTTTGTGCATGAACGAGATCTGTACATGTCCTCCACATTATTAAAAGTGGCGAGTGAAAATAGCTCAGTTGTTGCTGTTGTTGGAAAGGGTCATTTACAGGGAATAAAGAAGCATTGGAAGCAACCTGTCGTGGTGAAGGATCTCATGACAGTCCCTGAACCAGCTGTATCTGCAATAAGAATCGTGAGATCCGTTGTTGTTGTCTTGGCTGCGGTGGCCATTATATCAGAAAGTGAAATAACTCTAAGAGATGATGGGGTGGTCATTATTTCGAGGAAAAAATAA 1281 0.4418 MVLRLFSTSADQVSRVTHHVPLVLVVHSHHSRVTAPYLSSQHQILYVMFQRLIGHLVIRTRTLNQLARVTSFIHRHKSLLAAPFSCSQTLSSLQFSTDTSAFTHHPVRLPEDLSKNLIVLSCESSAEGGVCHVYLVGVSHGSKVLILVVQNQESYRRVQATVKFLKPEAVFLELCQSRASILTRKNYKTADDPHEDEFRVAYEEAIKYGGKVIFGDRPDKVFPGSEFRVAYEDATKYGGRVILGDRPVQVGLVFQFNMFKAEKIYTLLMLNYPLNNRVMFFTLMSRSSIDRIANYIKEILDSCLNLTWVCLLQQKETDDSGMNMWCPTFMEVFVHERDLYMSSTLLKVASENSSVVAVVGKGHLQGIKKHWKQPVVVKDLMTVPEPAVSAIRIVRSVVVVLAAVAIISESEITLRDDGVVIISRKK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01571 426 Pfam TraB/PrgY/gumN family 323 373 IPR002816 -
Vimu5g01571 426 CDD TraB_PrgY-like 133 371 IPR046345 -
Vimu5g01571 426 PANTHER PHEROMONE SHUTDOWN PROTEIN 104 189 IPR046345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01571 Vimu-Chr5 27185053 27189628 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01571 - - vra:106780480 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01571 5 27185053 27189628 Vimu5g01571 5 27185053 27189628 ECH