Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01511 ATGGCGGTGGAGAGTGTCAAAACGGGTTCTGATGGGAAAGTTTGGAGCTTTTGTAGTATGCCATTTTGGCAAACAACTCATCCTTCTTCATCTTCTTCAACTTCCTCTATGCATAACAGTGTTCACCATCAGAGCCAGATTCTTCAATCTCTTGATAGATCCACTTATCAACCTTCCACCACTGTTTCTTCTGTGGCTAAGTCTTTGCTCCCAACAAGGAGAAGACTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCAGGTGGTATACTTGCACCTGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTCAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTTGCAGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACGCCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAGTTAGCTGAGGCAGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCAAGAGGAAACAGGTCCTCGAGTTGCTGGAGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAGGCAGCAGGTTGAAGTGGTAGATTCAGTGTAA 792 0.4394 MAVESVKTGSDGKVWSFCSMPFWQTTHPSSSSSTSSMHNSVHHQSQILQSLDRSTYQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPERPSPALDKLKRQLAEAEAALEARKKPQEETGPRVAGEGLVIDEWKERRERYLARQQVEVVDSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01511 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 74 257 IPR016763 GO:0005789
Vimu5g01511 263 MobiDBLite consensus disorder prediction 29 55 - -
Vimu5g01511 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 197 IPR000535 -
Vimu5g01511 263 Pfam MSP (Major sperm protein) domain 76 186 IPR000535 -
Vimu5g01511 263 Gene3D Immunoglobulins 71 201 IPR013783 -
Vimu5g01511 263 SUPERFAMILY PapD-like 64 204 IPR008962 -
Vimu5g01511 263 FunFam vesicle-associated protein 4-1-like 71 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01511 Vimu-Chr5 26317805 26320349 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01511 - - gmx:100820576 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01511 5 26317805 26320349 Vimu5g01511 5 26317805 26320349 ECH