Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01498 ACTGAGCGCAGGAAGAGATCTTGGTTTGCCCTTCAAGTGAAGGGAAGTTTGATTCTGGTTTGGCGGTACCACGAGAGTATGAGGAAAAATGCAGGTTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGGATTCTCCCTTTTTTTGCAAGTTTGATTATATCTATGAGTCTGGTTCTGACAGCTATTCTTGGGGCACTTAGTTCTGATAGTGGGGGAGAGCAATCACCGTTTGAAATCATTTCCTTCAAGAGATCAGAGAATTCCAATGGATATTTTGTGGAATCAGATATAGAAAGGTCTTCTAATGTTAGTGTGGTGAAAAGGGAGGCACCAAGGTTTGCCTACCTTATATCAGGCACCAAGGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTGTACCACCCAAGGAATCAATACATCTTGCATTTAGATCTCGAGGCACCGCCCAGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCAGTTTTTCGTGAGGTGGAGAATGTTCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCTACGATGATTGCTTGCACCCTCCAAGCTATTGCAATACTGTTGAAGGAAAGTTCAGAATGGGACTGGTTTATTAACCTCAGTGCTTCAGATTATCCTCTTATGACACAGGATGATTTGCTTTATGTTTTCTCGAATCTGTCAAGGAATCTCAATTTCATTGAGCATACACACATTGCTGGTTGGAAATTGAATCAAAGAGCAAGACCCATCATTATTGATCCTGCCCTTTACTTATCAAAGAAATCTGATTTAGCATTGACCACTCAACGAAGAACCCTTCCCACGTCTTTTAAACTGTTTACTGGTTCAGCTTGGGTTGTACTGACTCGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCACGGACCATGCTAATGTACTATACAAATTTTGTGTCCTCTCCAGAGGGATACTTTCACACTGTCATTTGTAACACTGAGGAATTCCGTCACACTGCCATAAGCCATGATCTTCACTACATTGCTTGGGACACTCCCCCAAAGCAGCATCCCATCTCCTTAACCATGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCACTTTTTGCGCGCAAATTTGCTAAGGATGATCCAGTTCTAGACAAGATTGACAAGGAACTTCTGGGGCGCACCCACAGATTTTCACCTGGGGCTTGGTGTGTTGGAACCACAGAAGGTGGGGCTGACCCTTGTTCTGTTCGTGGCAATGTTACAATGTTTAGGCCAGGCCCTGGTGCTGATAGGCTGAGTGAGCTGCTTCATGTGCTGTTATCTAAAGAATCTCTAAGCAAGCAGTGTTTGTGA 1377 0.435 TERRKRSWFALQVKGSLILVWRYHESMRKNAGSHSGRMFSDRKWILPFFASLIISMSLVLTAILGALSSDSGGEQSPFEIISFKRSENSNGYFVESDIERSSNVSVVKREAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPVFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLMTQDDLLYVFSNLSRNLNFIEHTHIAGWKLNQRARPIIIDPALYLSKKSDLALTTQRRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTEEFRHTAISHDLHYIAWDTPPKQHPISLTMKDFDKMVKSKALFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCVGTTEGGADPCSVRGNVTMFRPGPGADRLSELLHVLLSKESLSKQCL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01498 458 Pfam Core-2/I-Branching enzyme 114 373 IPR003406 GO:0016020|GO:0016757
Vimu5g01498 458 PANTHER GLYCOSYLTRANSFERASE 41 457 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01498 Vimu-Chr5 26173792 26177134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01498 107 457 Glycosyltransferase AT1G03520 77.778 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01498 - - gmx:100795146 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01498 5 26173792 26177134 Vimu5g01498 5 26173792 26177134 ECH