Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01484 ATGGCTTCCAAAGCTTCCTCATTCCTTTCCCTTGTGCTCATTTCTAATATCCTCATTGCCATAGCAGTTGCTGGATGCAGCATTTCCAACAACATCAACACACAAGACAAGAAAGAGCCTCAGTTCTTGTTCAAGTCTCATGATAGGGTTTATATTCCAGGCCTTGGACCTGTAGGATTTCCACCCAAATTTCACGTTACACCTCACAATCCATTTTCTCATGGCAATGGAGGACTAGGAGCAGGAACAGGAGCAGGAACAGGAACTGGAGGAACTGGTTCAGGAACAGGAACTGGTTCAGGAACAGGAACTGGATCAGGATCAACTGGT 330 0.4576 MASKASSFLSLVLISNILIAIAVAGCSISNNINTQDKKEPQFLFKSHDRVYIPGLGPVGFPPKFHVTPHNPFSHGNGGLGAGTGAGTGTGGTGSGTGTGSGTGTGSGSTG 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01484 110 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vimu5g01484 110 MobiDBLite consensus disorder prediction 87 110 - -
Vimu5g01484 110 PANTHER CELL WALL PROTEIN-RELATED 1 86 IPR034565 -
Vimu5g01484 110 MobiDBLite consensus disorder prediction 66 110 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01484 - K11408 vra:106755985 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01484 5 25927765 25928145 Vimu4g01019 4 8589425 8589838 PCT