Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01478 ATGACCTACTTCGCTGGCGAAGCTCTAGTTAGAAGGGAAGAATGCAATAATGGTTCTTGGCATGAAGGCGAGACAAGTCGTCTCAAGTTGAACATCGAGACGGGTCTGGCTGGGTTAAGGACAAATATCATGGTTGTCTTGTATGGAAAGTTGTCGTTTCGGTTCATTGACATGTTCATGTTCTCTTTATGCTATCACTCTTTGCCTAAGGATGCTTCCAAATTTGAAATGCAGGTTGACGAGGATGAGATTTATTGGAGACACAGAAAGGAAGATGAAGAGTTGGAATGGACACCTAATTCCACTCACTTAATATCTCAGTTGACTCAATGTTTTACTAATGCTATGGTTGGATCAAGATCATGGATAGGAGGACTCTTTCACCGCACAAGCACTAAGCGAAATAATGAAAAATTTGTTGACTATCCTTTGAGTCCCATTGAGGAGGAAAGACTTCAAAGGCTCCAAGAACGGGTGCAAGTGGCTTATGATGAAACTCGCCCCGAACATCAAGAAGCACTGAGAGCATTATGGGTGTGTTCCTTTCCCAATGTATCTCTGGAAGGCCTAATTTCCGACCAATGGAAAGATATGGGATGGCAAGGTCCTAATCCATCAACTGACTTTAGGGGATGTGGCTTCATTTCCCTTGAAAATCTACTGTTTTTCGCGAGGAAATACCCGGCATCTTTTCACAGGTTGTTACTGAAGAAAGAAGGAATCAGAGCAACCTGGGAGTACCCATTTGCTGTTGCTGGCATTAATATATCATATATGTTGATACAGATGTTGGATTTATACTCAGAAAAGCCACGATGTCTTCCAGGCGCGAATTTTCTCAAGTTATTAGGAGAAAATGAAGAAGCGTTCGATATTTTATACTGCATAGCATTTGAGATGATGGATGCACAATGGCTGGCTATGCACGCTTCCTACATGGATTTTAACGATGTTCTAAATGCAACACGAATTCAATTGGAGAGAGAGCTTTCCTTAGAAGACATCAACAGAATTCAAGATCTGCCTGCTTACAATCTGTTGTAA 1044 0.4157 MTYFAGEALVRREECNNGSWHEGETSRLKLNIETGLAGLRTNIMVVLYGKLSFRFIDMFMFSLCYHSLPKDASKFEMQVDEDEIYWRHRKEDEELEWTPNSTHLISQLTQCFTNAMVGSRSWIGGLFHRTSTKRNNEKFVDYPLSPIEEERLQRLQERVQVAYDETRPEHQEALRALWVCSFPNVSLEGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARKYPASFHRLLLKKEGIRATWEYPFAVAGINISYMLIQMLDLYSEKPRCLPGANFLKLLGENEEAFDILYCIAFEMMDAQWLAMHASYMDFNDVLNATRIQLERELSLEDINRIQDLPAYNLL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01478 347 Pfam ELMO/CED-12 family 154 319 IPR006816 -
Vimu5g01478 347 ProSiteProfiles ELMO domain profile. 169 330 IPR006816 -
Vimu5g01478 347 PANTHER ENGULFMENT AND CELL MOTILITY 89 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01478 Vimu-Chr5 25764883 25774466 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01478 K23538 - gmx:100811853 510.375