Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01455 ATGTTCCACTGTTTTTCTGAGACAGTGTTGTTGAATTGCAATATGATGGAGAAGATCCAGCACAGTGAAGTGGAAGTCAACGGACTGAAGCTGCACGTGGCAGAGATTGGAACTGGGTCCAAGGCAGTGCTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTGTGGCAAACGCTGGTTATAGAGCTATTGCCTTTGATTTCAGAGGCTATGGACTCTCTCAGCAACCAGCTGAGCCAGAAAAGGAAACCATGTATGACCTAGTTCATGAAATAGTGGGTCTTTTGGATGCCTTAAACATAACCAAGGCTTTCCTTGTTGCCAAGGATTTTGGGGCAATCCCGGCATATCTTACAGCAGCCTTGCACCCACAAAGAGTGGGTGCTGTCATAACTTTAGGCGTTCCTTTCTTGCTTCCTGGTCCCTCTGCTGTCCAAAACCACCTTCTCCCCAAAGGCTTCTACATTACTAGGTGGCAGGAGCCTGGGAGAGCAGAGGCAGATTTTGGCCGGTTTCCTGTGAAATCGGTGATAAGGAACATCTACACTCTCTTCTCTAAAAGTGAGGTTCCAATAGCAGCTGATGATCAAGAAATCATGGACTTGTTCAACCCATCTACTCCTCTACCACCATGGTTCTCTGAGGAAGACCTTGCAACCTATGCATCTTTATATGAAAAATCTGGATTCAGATATGCATTACAGGTTCCTTACAGGAGTCTCAATGTGGAAACTGGCTTAGGTGAAGTGAAGGTTACAAATCCAGCACTTCTCATCATGGGTGAGAAAGATTATGTTTTCAAGTTTCCAGGCATGGAAGACTATATCCGAGGTGGGGCAGTGAAAAATGTTGTGCCGGACTTGGAAATCACATATATTCCAGAAGGAAGTCATTTTGTGCATGAACAAATTCCAGACAAGGTGAACCAGCTCATCATTGATTTCATTGACAAGAAAAGCATCTGA 987 0.4488 MFHCFSETVLLNCNMMEKIQHSEVEVNGLKLHVAEIGTGSKAVLFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSQQPAEPEKETMYDLVHEIVGLLDALNITKAFLVAKDFGAIPAYLTAALHPQRVGAVITLGVPFLLPGPSAVQNHLLPKGFYITRWQEPGRAEADFGRFPVKSVIRNIYTLFSKSEVPIAADDQEIMDLFNPSTPLPPWFSEEDLATYASLYEKSGFRYALQVPYRSLNVETGLGEVKVTNPALLIMGEKDYVFKFPGMEDYIRGGAVKNVVPDLEITYIPEGSHFVHEQIPDKVNQLIIDFIDKKSI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01455 328 Gene3D alpha/beta hydrolase 16 327 IPR029058 -
Vimu5g01455 328 SUPERFAMILY alpha/beta-Hydrolases 15 325 IPR029058 -
Vimu5g01455 328 PRINTS Epoxide hydrolase signature 261 277 IPR000639 GO:0003824
Vimu5g01455 328 PRINTS Epoxide hydrolase signature 300 322 IPR000639 GO:0003824
Vimu5g01455 328 PRINTS Epoxide hydrolase signature 47 65 IPR000639 GO:0003824
Vimu5g01455 328 PRINTS Epoxide hydrolase signature 67 82 IPR000639 GO:0003824
Vimu5g01455 328 PRINTS Epoxide hydrolase signature 127 140 IPR000639 GO:0003824
Vimu5g01455 328 PANTHER EPOXIDE HYDROLASE 20 325 - -
Vimu5g01455 328 Pfam alpha/beta hydrolase fold 42 276 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01455 Vimu-Chr5 25557020 25560324 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01455 16 325 Acyl Lipid Metabolism Gene Families AT4G02340 38.199 5.20e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01455 - - gmx:100812544 575.859