Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01431 GCCTTGGACTATGTTATAGCACAAGCAAGGAAACATGGAATTAGGCCGCTCCTTAGCTTAGTAAATAACTTGCATGCATATGGTGGGAAGACTCAATATGTTAAATGGGCATGGCAAGAAGGAGTAGGGCTAAGCTCATCTAACGATTCCTTCTTTGATCCATCAATTCGCAGTTATTTCAAGAATTATATCAAGGATTGGATAGAGGAAATGTCAGCTTTTGTCAAACTCATCGACAAACGCCATCTCTTGATAGTTGGACTCGAAGGTTTTTACGGTCCTAATGATCCAAAAATATTGACGGTGAACCCTGAGGACTGGGCATCTCGACTTGGATCTGATTTTATAGGAACTCCTTGA 360 0.4111 ALDYVIAQARKHGIRPLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFDPSIRSYFKNYIKDWIEEMSAFVKLIDKRHLLIVGLEGFYGPNDPKILTVNPEDWASRLGSDFIGTP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01431 119 SUPERFAMILY (Trans)glycosidases 2 108 IPR017853 -
Vimu5g01431 119 Gene3D Glycosidases 66 118 - -
Vimu5g01431 119 Gene3D Glycosidases 1 65 - -
Vimu5g01431 119 PANTHER - 1 65 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01431 Vimu-Chr5 25081396 25082641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01431 1 116 Glycoside Hydrolase AT4G28320 59.494 1.92e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01431 K19355 - gmx:100811461 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01431 5 25081396 25082641 Vimu5g01431 5 25081396 25082641 ECH