Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01418 ATGATGGAGCTCACTATTACGCAACCTGATGATTGGCATCTTCACCTTCGTGATGGTTCTCTTCTTGAAGCTGTCCTCCCTCACAGTGCTAAGAATTTTGGAAGGGCTATAGTGATGCCAAATTTGAAACCACCCATCAGTACCACATCTGCCGCTGTCACTTATCGAGAGTCCATTTTGAAAGCAATACCTACAGATAGCAACTTCACTCCTCTCATGACGCTTTACCTCACAGACTTGACTACGCCTGATGAGATTAAACTTGCAAAAAAAAGTGGACTTGTGTATGGTGTGAAGTTGTATCCTGCTGGTGCCACTACGAATTCCCAAGATGGTGTTACAGATCTTTTTGGAAATTGTTTTTCTGTTCTCGAGGAAATGGTTGAGCAAAATTTACCATTATTGGTTCACGGAGAGGTTACAAATTCAGATGTAGATATTTTTGACCGAGAAAAGGTCTTTATTGAAACAATTTTGGAGCCTTTAGTTCAAAGGCTTCCACAGCTGAAGGTTGTAATGGAGCATATTACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGCAACCGTAACACCACAACATCTTCTTCTGAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTTACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCACCACATGATAGGCGAAGAAAGGAATGTTCATGCGGATGTGCTGGGATATACAACTCCCCGGTAGCTCTATCACTATATGCCAAGGTTTTTGAAGAGGCCGGTGCACTTGATAAACTGGAGGCTTTTACAAGCTTTAATGGGCCTGACTTCTATGGCCTCCCTAGAAATAAGTCAAAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCTGATTGTTTTTCATTTCCAATTGGAGACATTGTTCCCATGTTTGCTGGTGAAACCCTTGAATGGGAGGCATTGCCTTGTTGA 1032 0.4196 MMELTITQPDDWHLHLRDGSLLEAVLPHSAKNFGRAIVMPNLKPPISTTSAAVTYRESILKAIPTDSNFTPLMTLYLTDLTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCFSVLEEMVEQNLPLLVHGEVTNSDVDIFDREKVFIETILEPLVQRLPQLKVVMEHITTADAVKFVESCKEATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRRKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKAPWKVPDCFSFPIGDIVPMFAGETLEWEALPC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01418 343 CDD DHOase 4 338 IPR004721 GO:0004151|GO:0019856
Vimu5g01418 343 PIRSF Dihydroorotase 1 342 IPR004721 GO:0004151|GO:0019856
Vimu5g01418 343 NCBIfam dihydroorotase, homodimeric type 3 339 IPR004721 GO:0004151|GO:0019856
Vimu5g01418 343 FunFam Dihydroorotase 1 341 - -
Vimu5g01418 343 Pfam Amidohydrolase family 11 316 IPR006680 GO:0016787
Vimu5g01418 343 ProSitePatterns Dihydroorotase signature 2. 243 254 IPR002195 GO:0016812
Vimu5g01418 343 ProSitePatterns Dihydroorotase signature 1. 11 19 IPR002195 GO:0016812
Vimu5g01418 343 PANTHER DIHYDROOROTASE 2 339 IPR004721 GO:0004151|GO:0019856
Vimu5g01418 343 Gene3D - 2 340 - -
Vimu5g01418 343 SUPERFAMILY Metallo-dependent hydrolases 2 339 IPR032466 -
Vimu5g01418 343 Hamap Dihydroorotase [pyrC]. 2 341 IPR004721 GO:0004151|GO:0019856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01418 K01465 - gmx:100815210 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01418 5 24932810 24936383 Vimu5g01418 5 24932810 24936383 ECH