Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01407 TCCAACAACAGTATAATGGAGAACTCAGAAGATGTTACAGAGCCAGTGAGTCCCAGTGGACGATACTTCAACACCACAGTGCTGTGTGCTTATGTTTATGGCTTCTTAGAATCAGAAACTCCAATTGAATTTTCTCAAGCCGAATATTTGTTCGAACAAGTGTTTCTACCATTGAATCCACGATTCTCTTCTATAATGGTGAGAGATGAAAAGGGAGAAATGAAATGGAAAAGGGTACAAGTGAAAGCTGAAGATCACATAAAGGTTCCAACATTCCCAGAAAACGAGTCACTGGAATCGTATGACCAATATTTTGAGGAGTATGTGACAGAGTTGATGATGGAAAGAACAGCACAAGATAAACCCCTTTGGGAAATTCATGTGATCAAATACCCCACAAGCACTTGTTCTGGCACCTTGATATTCAAACTTCACCATGCTCTTGGAGATGGTTACTCCCTTATGGGAGCTCTTTTATCTTCTCTTCAAAGAGCCGATGACCCTTCTCTTCCTCTCTCCTTTCCTTCACGAAAATCTTCATCATCATCATCATCAACTTCTGAGAAGGGTTTCTTCAGGTGGTTCTCTTCCACAGTGTTATCTTTTTTCAACTCTATTTCAGACTTTGGATGGAGCATAGTCAAAAGTACTGTTGTTGAGGATGATAAATCACCTATAAGGAGTGGTGAGGAAGGTGTGGAGTTTCTACCTTGTGTCATATCAAACATATCCTTTTCTCTTGATCAAGTCAAAAATATCAAGTCCAAGCTTGGAGTGACAATAAACGATGTGATAACTGGGGCAATCTTCTATGGGATTAGGCTATACATGCAAGAGAATGATAATGAGGCAGGGAAAGCAAATTCAACAGGGTTGGTGATGCTGAGTACAAGGAACATTGGAAGTTACCAATCAGTCCAAGAAATGATGAAGGCTGATTCAAAATCTCCTTGGGGGAACCATATCTCTTTCTTGCATGTACCAATACCTAAGCTAAGCCAAACCAACATATCCAACCCTCTTGAATTTGTGTGGAATGCCCAAAAAGAAATTAAGAGGAAGAGAGATTCTTTCACTGTGTTTCTCATTGAATGGGTTTTAGATATGGAGCTGAAATTGAGAGGATATGAGGCAGTGGCTAAACATATCTATGGGACACTGAGAAGTTCAAGTGTTGTTGTGTCGAACTTGATTGGACCAGTGGAACCTATGGTTTTGGCAAATCATCCTGTAAAAGGCTTGTACTTCACAATGACAGGTGGACCAGAGAGTATAAATATTTCAGTCATAAGCTACACAAGAACCTTGAGAATTACCTTGAAAACACAGAAAGGCTTCATTGATGAGAAGAAGTTCAAATTGTGCGTGGTGAAAGCCTTTGACGTCATATCCAAAGCAGCAATGGAGATAGATACCCAACAAAAGCAAAGGCTAAGTTAA 1440 0.3993 SNNSIMENSEDVTEPVSPSGRYFNTTVLCAYVYGFLESETPIEFSQAEYLFEQVFLPLNPRFSSIMVRDEKGEMKWKRVQVKAEDHIKVPTFPENESLESYDQYFEEYVTELMMERTAQDKPLWEIHVIKYPTSTCSGTLIFKLHHALGDGYSLMGALLSSLQRADDPSLPLSFPSRKSSSSSSSTSEKGFFRWFSSTVLSFFNSISDFGWSIVKSTVVEDDKSPIRSGEEGVEFLPCVISNISFSLDQVKNIKSKLGVTINDVITGAIFYGIRLYMQENDNEAGKANSTGLVMLSTRNIGSYQSVQEMMKADSKSPWGNHISFLHVPIPKLSQTNISNPLEFVWNAQKEIKRKRDSFTVFLIEWVLDMELKLRGYEAVAKHIYGTLRSSSVVVSNLIGPVEPMVLANHPVKGLYFTMTGGPESINISVISYTRTLRITLKTQKGFIDEKKFKLCVVKAFDVISKAAMEIDTQQKQRLS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01407 479 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 13 473 IPR045034 GO:0008374|GO:0045017
Vimu5g01407 479 Pfam WS/DGAT C-terminal domain 318 463 IPR009721 -
Vimu5g01407 479 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 105 265 IPR004255 GO:0004144|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01407 Vimu-Chr5 24833858 24836339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01407 14 469 Acyl Lipid Metabolism Gene Families AT5G53390 27.651 9.46e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01407 - - gmx:100816273 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01407 5 24833858 24836339 Vimu5g01407 5 24833858 24836339 ECH