Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01283 ATGATGGCTCTCTCTTTGCCACTTCAGAACCTCTCCGCAGCCATCTCCGCCACCGGCAATGCCACAACGGCAGCATCTCGGCCTCCGAAGGGGCGGCGCTGGGAGGTTCACTCGGTGGTTTCCAATACAAGCGCCGCCGTCCCGGTGCAGTTCGGCGGGTACGAAGAAGGGAAGCTTGAGCGACCCAAGTGGACTGGGGAGACCCCTCTTTCTCGGCTGGTTAAAGCTATCATCTCTTTCAAGCCTTTGTACTCTGTTCTCAAGCTTGGTGCTAGAAGGGTTTTGATAAGTACAGCTGAGAAGAACAACATACCTTGGAGGAAGATGGCGAAAGATATTTTAGAGTCAGAAGTGTATAGGGAGATGGACATCATTCAAAACCAGTCTTTAGTGTACCCTGATTATTATTTGAATCCATTCCATGCATACGAGGAGGGCAATCTTACATGGCTGGCCGCAGCAGAAGCAGAGGCTGCTACAATGTCAATGGTTAGACGAGTAGTACCAAATGCTTCCTCATTGGAGGAAGCAAGTCAGATACTGCGCGGCAATTGGCTTCTTGCAATTGAACAACACCATATACAGTATTCAGAATCATCTGTGATTAATGACATTCTAGATATTGGATGCTCTGTCGGTGTAAGCACAAAATATCTTGCAGACAAGTTCCCCACAGCCAATGTCACAGGGCTAGATCTGTCACCGTATTTTCTAGCTGTGGCTCAGCATAAAGAAAAGACTGTAATGCCCAGGAAAACTCCTCTAAGATGGATACATGCAAATGCGGAAGACACGGGCTTGCCTTCTAAATCATTCGACCTTGTTTCTCTTGCCTTTGTGCTTCATGAATGTCCTACAAGAGCTATAGTGAATATAGTGAGGGAAGCTTTCCGTCTCCTTCGGCCTGGAGGCACACTAGCTTTGACAGATTTGTCGCTGAAGTCAAAGGTCCTTCAGGAATTGTCTCCTGTCCTGTTTACACTGCTCAAGACCACAGAGCCTTTTCTGGACGAGTATTTCTTGACTGATATGGAAGAAACACTGACGGAAGCTGGTTTTGTGAACATAACATCAATTCTTACAGACCCCAAACACGTCACAGTTACAGCAACGGTGCCTCAATGA 1125 0.4729 MMALSLPLQNLSAAISATGNATTAASRPPKGRRWEVHSVVSNTSAAVPVQFGGYEEGKLERPKWTGETPLSRLVKAIISFKPLYSVLKLGARRVLISTAEKNNIPWRKMAKDILESEVYREMDIIQNQSLVYPDYYLNPFHAYEEGNLTWLAAAEAEAATMSMVRRVVPNASSLEEASQILRGNWLLAIEQHHIQYSESSVINDILDIGCSVGVSTKYLADKFPTANVTGLDLSPYFLAVAQHKEKTVMPRKTPLRWIHANAEDTGLPSKSFDLVSLAFVLHECPTRAIVNIVREAFRLLRPGGTLALTDLSLKSKVLQELSPVLFTLLKTTEPFLDEYFLTDMEETLTEAGFVNITSILTDPKHVTVTATVPQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01283 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 204 359 IPR029063 -
Vimu5g01283 374 PANTHER METHYLTRANSFERASE 94 373 - -
Vimu5g01283 374 CDD AdoMet_MTases 204 311 - -
Vimu5g01283 374 Gene3D Vaccinia Virus protein VP39 203 371 IPR029063 -
Vimu5g01283 374 Pfam Methyltransferase domain 206 307 IPR013216 GO:0008168
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01283 205 358 Acyl Lipid Metabolism Gene Families AT1G48600 26.582 1.22e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01283 - - gmx:100788294 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01283 5 22795444 22800560 Vimu5g01283 5 22795444 22800560 ECH