Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu5g01258 | ATGGGTTTCCGTTTACCTATTATCAAAAAGGCCTTATTTGCAACAAATCAAGCATCTTCGAAAGTAGTGGATGCACAAAAGGGTCACCTTGCAGTTTATGTCGGAGAGAAAATGAAGCGGTTCGTGATCCCTGTGTCATACTTGAATCAACCATCGTTCCAAGAGTTGTTGAGTAAAGCTGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCTTAAAGTATGTTGGAGAGAATCAAAAGCGATTTGTGATTCCCATGTCATACCTTACTCATCCTTCATTCCAAGATCATTCCAAGACTTGTTGTGTCAAGCTGAAGAAGTGTTTGGATAAGATCATCCCATGGGTATAG | 384 | 0.4089 | MGFRLPIIKKALFATNQASSKVVDAQKGHLAVYVGEKMKRFVIPVSYLNQPSFQELLSKAEEEFGYDHPMGGLTIPCSEDVFLKYVGENQKRFVIPMSYLTHPSFQDHSKTCCVKLKKCLDKIIPWV | 127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu5g01258 | 127 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED | 84 | 107 | IPR003676 | GO:0009733 | |
Vimu5g01258 | 127 | Pfam | Auxin responsive protein | 18 | 83 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu5g01258 | Vimu-Chr5 | 22615767 | 22617310 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu5g01258 | 6 | 86 | Calmodulin-binding Proteins | AT3G43120 | 43.956 | 2.23e-17 | 71.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu5g01258 | K14488 | - | gmx:100820621 | 150.599 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu5g01258 | 5 | 22615767 | 22617310 | Vimu5g01258 | 5 | 22615767 | 22617310 | ECH |