Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01223 ATGCAGATTCATTACCGATGGTTTGATTCTGAGGCTAAAATACGTAAGCCACTTACAAGGTGTTATCAGCTTGCTGACCCTGGGGATTTTGGTCCGATTTGCAAGATGCCATATTATATACAGAGACTTTATAGGCTATGCAATGCATCCTTTTCACCTGATGGACCTGTGTCGGAAGAGGTCATTGAGAAAGTTCGTGAGAAGTTAGATGTAGGTCTTGAACAAGAAGCACAACTAGTTCGGAATTGGCCTGGGCCAGCACTTGAACGTAATGGGAGCCATCAATCTTTGCCACCTATAAAATATTTGCATTTGCATGAATGTGACTCCTTCTCTATAGGAATTTTTTGCATGCCCCCTTCATCTATCATTCCTCTCCATAATCATCCTGGAATGACAGTGTTGAGCAAGTTGTTGTATGGCTCAATGCATGTTAAATCCTATGATTGGATGGATGCATCTGGCTCTACTGATCAATCTGAAGTTCGACCTGCAAAGCTTGTGAAAGATACTGATATGACAGCACCAAGCCCCACAACAGTTCTTTACCCCAGCAGTGGAGGAAACATCCATTGTTTTAGAGCTATAACTCCTTGTGCTATCTTTGACATATTATCTCCTCCTTACTCTTCAGAGCATGGAAGACACTGCACCTACTTCCGGCGATCCCAACGGAGAGATCTCCCAGTTAATGTTGAGTTGGATGGAGTGACGTTTTCTGAAGTGACTTGGTTAGAAGAGTTTCAACCTCCTGATGACTTTGTGATCCGGAGAGGACTGTACAGGGGTCCAGTTATTAGAACTTGA 807 0.4325 MQIHYRWFDSEAKIRKPLTRCYQLADPGDFGPICKMPYYIQRLYRLCNASFSPDGPVSEEVIEKVREKLDVGLEQEAQLVRNWPGPALERNGSHQSLPPIKYLHLHECDSFSIGIFCMPPSSIIPLHNHPGMTVLSKLLYGSMHVKSYDWMDASGSTDQSEVRPAKLVKDTDMTAPSPTTVLYPSSGGNIHCFRAITPCAIFDILSPPYSSEHGRHCTYFRRSQRRDLPVNVELDGVTFSEVTWLEEFQPPDDFVIRRGLYRGPVIRT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01223 268 SUPERFAMILY RmlC-like cupins 36 225 IPR011051 -
Vimu5g01223 268 PANTHER UNCHARACTERIZED 40 265 IPR012864 GO:0016702
Vimu5g01223 268 Pfam PCO_ADO 69 266 IPR012864 GO:0016702
Vimu5g01223 268 CDD cupin_ADO 109 210 - -
Vimu5g01223 268 Gene3D Jelly Rolls 87 238 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01223 Vimu-Chr5 21582091 21587272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01223 K23953 - gmx:100805101 442.965