Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01153 ATGCTTGAAGGCAAGGCTGTGATTGGTGAGACTGACATGCTTCAGACCATGCAGCAAGATGCCATGGATTTAGCTTCCAAAGCACTTGATGTCTTTGATGTCACTGAAGCCATTGAGATTGCCAGATTTATAAAGAAGGAATTTGATAGGATGCATGGACCTGGTTGGCAGTGTATTGTAGGCACTGATTTTGGTTCATTTGTGACCCACTGTTGTGGCTGTTTTATCTATTTCTGTTTGGGTAACTTAGCCATTTTGCTCTTCAGGGGCTCAGCTGCTCCAGAGGCACATGAAAATCAGTTCTCAGCTCTACAGGCAGCCAAAGCATAA 330 0.4424 MLEGKAVIGETDMLQTMQQDAMDLASKALDVFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAHENQFSALQAAKA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01153 109 PANTHER DYNEIN LIGHT CHAIN 5 89 IPR001372 GO:0007017|GO:0030286
Vimu5g01153 109 SUPERFAMILY DLC 1 90 IPR037177 GO:0007017|GO:0030286
Vimu5g01153 109 CDD DLC-like_DYNLL1_DYNLL2 5 89 - -
Vimu5g01153 109 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 90 IPR037177 GO:0007017|GO:0030286
Vimu5g01153 109 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
Vimu5g01153 109 FunFam Dynein light chain 1 90 - -
Vimu5g01153 109 Pfam Dynein light chain type 1 5 89 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01153 Vimu-Chr5 19343249 19343697 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01153 K10418 - gmx:100779040 217.238